Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.93■■□□□ 1.42
ZC3HC1Q86WB0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ZC3HC1Q86WB0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
ZC3HC1Q86WB0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ZC3HC1Q86WB0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ZC3HC1Q86WB0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZC3HC1Q86WB0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZC3HC1Q86WB0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZC3HC1Q86WB0 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
ZC3HC1Q86WB0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZC3HC1Q86WB0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
ZC3HC1Q86WB0 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.92■■□□□ 1.42
ZC3HC1Q86WB0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.92■■□□□ 1.42
ZC3HC1Q86WB0 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZC3HC1Q86WB0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZC3HC1Q86WB0 AC025884.2-201ENST00000553429 711 ntBASIC23.92■■□□□ 1.42
ZC3HC1Q86WB0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC23.92■■□□□ 1.42
ZC3HC1Q86WB0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
ZC3HC1Q86WB0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.92■■□□□ 1.42
ZC3HC1Q86WB0 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
ZC3HC1Q86WB0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.91■■□□□ 1.42
ZC3HC1Q86WB0 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ZC3HC1Q86WB0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
ZC3HC1Q86WB0 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
ZC3HC1Q86WB0 MIR639-201ENST00000384974 98 ntBASIC23.91■■□□□ 1.42
ZC3HC1Q86WB0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ZC3HC1Q86WB0 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ZC3HC1Q86WB0 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
ZC3HC1Q86WB0 AC138932.3-201ENST00000567634 1902 ntBASIC23.9■■□□□ 1.42
ZC3HC1Q86WB0 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.9■■□□□ 1.42
ZC3HC1Q86WB0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC23.9■■□□□ 1.42
ZC3HC1Q86WB0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ZC3HC1Q86WB0 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
ZC3HC1Q86WB0 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
ZC3HC1Q86WB0 AC093323.1-202ENST00000635031 2045 ntBASIC23.89■■□□□ 1.42
ZC3HC1Q86WB0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
ZC3HC1Q86WB0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.89■■□□□ 1.41
ZC3HC1Q86WB0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.89■■□□□ 1.41
ZC3HC1Q86WB0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.89■■□□□ 1.41
ZC3HC1Q86WB0 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ZC3HC1Q86WB0 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.89■■□□□ 1.41
ZC3HC1Q86WB0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
ZC3HC1Q86WB0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
ZC3HC1Q86WB0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
ZC3HC1Q86WB0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ZC3HC1Q86WB0 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
ZC3HC1Q86WB0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ZC3HC1Q86WB0 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
ZC3HC1Q86WB0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
ZC3HC1Q86WB0 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
ZC3HC1Q86WB0 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
ZC3HC1Q86WB0 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
ZC3HC1Q86WB0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.86■■□□□ 1.41
ZC3HC1Q86WB0 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZC3HC1Q86WB0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.86■■□□□ 1.41
ZC3HC1Q86WB0 AC092296.2-201ENST00000589470 999 ntBASIC23.86■■□□□ 1.41
ZC3HC1Q86WB0 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZC3HC1Q86WB0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
ZC3HC1Q86WB0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ZC3HC1Q86WB0 AC097639.1-201ENST00000565519 1891 ntBASIC23.85■■□□□ 1.41
ZC3HC1Q86WB0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC23.85■■□□□ 1.41
ZC3HC1Q86WB0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
ZC3HC1Q86WB0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.85■■□□□ 1.41
ZC3HC1Q86WB0 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
ZC3HC1Q86WB0 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZC3HC1Q86WB0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
ZC3HC1Q86WB0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZC3HC1Q86WB0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
ZC3HC1Q86WB0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC23.84■■□□□ 1.41
ZC3HC1Q86WB0 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
ZC3HC1Q86WB0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.83■■□□□ 1.41
ZC3HC1Q86WB0 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZC3HC1Q86WB0 SMPD5-203ENST00000639008 1464 ntBASIC23.82■■□□□ 1.4
ZC3HC1Q86WB0 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.82■■□□□ 1.4
ZC3HC1Q86WB0 MIR3960-201ENST00000583311 91 ntBASIC23.82■■□□□ 1.4
ZC3HC1Q86WB0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.82■■□□□ 1.4
ZC3HC1Q86WB0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZC3HC1Q86WB0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
ZC3HC1Q86WB0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZC3HC1Q86WB0 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZC3HC1Q86WB0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.82■■□□□ 1.4
ZC3HC1Q86WB0 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZC3HC1Q86WB0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZC3HC1Q86WB0 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZC3HC1Q86WB0 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.81■■□□□ 1.4
ZC3HC1Q86WB0 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZC3HC1Q86WB0 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZC3HC1Q86WB0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.81■■□□□ 1.4
ZC3HC1Q86WB0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZC3HC1Q86WB0 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
ZC3HC1Q86WB0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZC3HC1Q86WB0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.79■■□□□ 1.4
ZC3HC1Q86WB0 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZC3HC1Q86WB0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
ZC3HC1Q86WB0 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
ZC3HC1Q86WB0 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZC3HC1Q86WB0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.79■■□□□ 1.4
ZC3HC1Q86WB0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ZC3HC1Q86WB0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZC3HC1Q86WB0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms