Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf88Q6PI97 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf88Q6PI97 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf88Q6PI97 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf88Q6PI97 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf88Q6PI97 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf88Q6PI97 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
C11orf88Q6PI97 DUX4L13-201ENST00000554103 1267 ntBASIC20.63■□□□□ 0.89
C11orf88Q6PI97 DUX4L15-201ENST00000611059 1267 ntBASIC20.63■□□□□ 0.89
C11orf88Q6PI97 DUX4L23-201ENST00000615195 1269 ntBASIC20.63■□□□□ 0.89
C11orf88Q6PI97 DUX4L24-201ENST00000617576 1269 ntBASIC20.63■□□□□ 0.89
C11orf88Q6PI97 DUX4L22-201ENST00000618238 1269 ntBASIC20.63■□□□□ 0.89
C11orf88Q6PI97 DUX4L20-201ENST00000619712 1269 ntBASIC20.63■□□□□ 0.89
C11orf88Q6PI97 DUX4L21-201ENST00000622058 1269 ntBASIC20.63■□□□□ 0.89
C11orf88Q6PI97 DUX4L10-201ENST00000622460 1267 ntBASIC20.63■□□□□ 0.89
C11orf88Q6PI97 DUX4L25-201ENST00000624915 1269 ntBASIC20.63■□□□□ 0.89
C11orf88Q6PI97 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.63■□□□□ 0.89
C11orf88Q6PI97 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.63■□□□□ 0.89
C11orf88Q6PI97 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
C11orf88Q6PI97 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C11orf88Q6PI97 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
C11orf88Q6PI97 AC133561.1-201ENST00000568600 2415 ntBASIC20.62■□□□□ 0.89
C11orf88Q6PI97 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.62■□□□□ 0.89
C11orf88Q6PI97 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
C11orf88Q6PI97 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
C11orf88Q6PI97 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
C11orf88Q6PI97 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
C11orf88Q6PI97 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
C11orf88Q6PI97 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
C11orf88Q6PI97 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
C11orf88Q6PI97 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.61■□□□□ 0.89
C11orf88Q6PI97 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.61■□□□□ 0.89
C11orf88Q6PI97 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
C11orf88Q6PI97 LINC00273-201ENST00000539813 1452 ntBASIC20.61■□□□□ 0.89
C11orf88Q6PI97 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.61■□□□□ 0.89
C11orf88Q6PI97 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.61■□□□□ 0.89
C11orf88Q6PI97 AP004609.3-201ENST00000610705 1884 ntBASIC20.6■□□□□ 0.89
C11orf88Q6PI97 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
C11orf88Q6PI97 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf88Q6PI97 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf88Q6PI97 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf88Q6PI97 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf88Q6PI97 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
C11orf88Q6PI97 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
C11orf88Q6PI97 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
C11orf88Q6PI97 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf88Q6PI97 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf88Q6PI97 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf88Q6PI97 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf88Q6PI97 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf88Q6PI97 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf88Q6PI97 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
C11orf88Q6PI97 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
C11orf88Q6PI97 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.59■□□□□ 0.89
C11orf88Q6PI97 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
C11orf88Q6PI97 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
C11orf88Q6PI97 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
C11orf88Q6PI97 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.58■□□□□ 0.88
C11orf88Q6PI97 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
C11orf88Q6PI97 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf88Q6PI97 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.57■□□□□ 0.88
C11orf88Q6PI97 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf88Q6PI97 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
C11orf88Q6PI97 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.57■□□□□ 0.88
C11orf88Q6PI97 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf88Q6PI97 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
C11orf88Q6PI97 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf88Q6PI97 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf88Q6PI97 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf88Q6PI97 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
C11orf88Q6PI97 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
C11orf88Q6PI97 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf88Q6PI97 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf88Q6PI97 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf88Q6PI97 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
C11orf88Q6PI97 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf88Q6PI97 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf88Q6PI97 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.56■□□□□ 0.88
C11orf88Q6PI97 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.56■□□□□ 0.88
C11orf88Q6PI97 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
C11orf88Q6PI97 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
C11orf88Q6PI97 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf88Q6PI97 AC142381.3-201ENST00000568208 1670 ntBASIC20.55■□□□□ 0.88
C11orf88Q6PI97 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf88Q6PI97 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
C11orf88Q6PI97 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf88Q6PI97 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf88Q6PI97 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
C11orf88Q6PI97 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
C11orf88Q6PI97 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
C11orf88Q6PI97 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf88Q6PI97 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf88Q6PI97 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.54■□□□□ 0.88
C11orf88Q6PI97 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.54■□□□□ 0.88
C11orf88Q6PI97 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
C11orf88Q6PI97 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.54■□□□□ 0.88
C11orf88Q6PI97 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
C11orf88Q6PI97 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.53■□□□□ 0.88
C11orf88Q6PI97 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
C11orf88Q6PI97 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms