Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF213Q63HN8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RNF213Q63HN8 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC13.27□□□□□ -0.29
RNF213Q63HN8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
RNF213Q63HN8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC13.27□□□□□ -0.29
RNF213Q63HN8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RNF213Q63HN8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RNF213Q63HN8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC13.27□□□□□ -0.29
RNF213Q63HN8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF213Q63HN8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RNF213Q63HN8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RNF213Q63HN8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC13.26□□□□□ -0.29
RNF213Q63HN8 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC13.26□□□□□ -0.29
RNF213Q63HN8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC13.25□□□□□ -0.29
RNF213Q63HN8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC13.25□□□□□ -0.29
RNF213Q63HN8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC13.25□□□□□ -0.29
RNF213Q63HN8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF213Q63HN8 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF213Q63HN8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC13.25□□□□□ -0.29
RNF213Q63HN8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF213Q63HN8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC13.25□□□□□ -0.29
RNF213Q63HN8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
RNF213Q63HN8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC13.25□□□□□ -0.29
RNF213Q63HN8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC13.25□□□□□ -0.29
RNF213Q63HN8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF213Q63HN8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF213Q63HN8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNF213Q63HN8 AL137784.2-201ENST00000607332 1000 ntBASIC13.25□□□□□ -0.29
RNF213Q63HN8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNF213Q63HN8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
RNF213Q63HN8 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
RNF213Q63HN8 AL356740.2-201ENST00000601559 647 ntBASIC13.24□□□□□ -0.29
RNF213Q63HN8 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNF213Q63HN8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC13.24□□□□□ -0.29
RNF213Q63HN8 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNF213Q63HN8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC13.24□□□□□ -0.29
RNF213Q63HN8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC13.24□□□□□ -0.29
RNF213Q63HN8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF213Q63HN8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC13.23□□□□□ -0.29
RNF213Q63HN8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RNF213Q63HN8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
RNF213Q63HN8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF213Q63HN8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC13.23□□□□□ -0.29
RNF213Q63HN8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
RNF213Q63HN8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RNF213Q63HN8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RNF213Q63HN8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RNF213Q63HN8 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RNF213Q63HN8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RNF213Q63HN8 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
RNF213Q63HN8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.22□□□□□ -0.29
RNF213Q63HN8 AL136162.1-201ENST00000607711 1078 ntBASIC13.22□□□□□ -0.29
RNF213Q63HN8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RNF213Q63HN8 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RNF213Q63HN8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RNF213Q63HN8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RNF213Q63HN8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC13.21□□□□□ -0.29
RNF213Q63HN8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RNF213Q63HN8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RNF213Q63HN8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
RNF213Q63HN8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
RNF213Q63HN8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC13.21□□□□□ -0.3
RNF213Q63HN8 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF213Q63HN8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF213Q63HN8 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.2□□□□□ -0.3
RNF213Q63HN8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF213Q63HN8 AP001330.3-201ENST00000520123 633 ntBASIC13.2□□□□□ -0.3
RNF213Q63HN8 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF213Q63HN8 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF213Q63HN8 AF213884.3-201ENST00000563833 479 ntBASIC13.2□□□□□ -0.3
RNF213Q63HN8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RNF213Q63HN8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF213Q63HN8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF213Q63HN8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF213Q63HN8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
RNF213Q63HN8 CA15P2-201ENST00000611168 834 ntBASIC13.2□□□□□ -0.3
RNF213Q63HN8 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF213Q63HN8 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF213Q63HN8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.19□□□□□ -0.3
RNF213Q63HN8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF213Q63HN8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
RNF213Q63HN8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF213Q63HN8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF213Q63HN8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF213Q63HN8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF213Q63HN8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF213Q63HN8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF213Q63HN8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF213Q63HN8 EMC9-206ENST00000560403 872 ntTSL 2 BASIC13.19□□□□□ -0.3
RNF213Q63HN8 KRT18P24-201ENST00000344739 1156 ntBASIC13.18□□□□□ -0.3
RNF213Q63HN8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF213Q63HN8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RNF213Q63HN8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RNF213Q63HN8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF213Q63HN8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF213Q63HN8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF213Q63HN8 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF213Q63HN8 AC004911.1-201ENST00000416316 871 ntBASIC13.18□□□□□ -0.3
RNF213Q63HN8 KRT18P5-201ENST00000436075 1291 ntBASIC13.18□□□□□ -0.3
RNF213Q63HN8 RPS2P7-201ENST00000447334 885 ntBASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms