Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.81■■■□□ 2.52
USPL1Q5W0Q7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
USPL1Q5W0Q7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
USPL1Q5W0Q7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
USPL1Q5W0Q7 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
USPL1Q5W0Q7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC30.8■■■□□ 2.52
USPL1Q5W0Q7 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
USPL1Q5W0Q7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.79■■■□□ 2.52
USPL1Q5W0Q7 BX664725.1-201ENST00000438252 379 ntBASIC30.79■■■□□ 2.52
USPL1Q5W0Q7 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.79■■■□□ 2.52
USPL1Q5W0Q7 MIR935-201ENST00000401179 91 ntBASIC30.78■■■□□ 2.52
USPL1Q5W0Q7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
USPL1Q5W0Q7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
USPL1Q5W0Q7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.77■■■□□ 2.52
USPL1Q5W0Q7 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
USPL1Q5W0Q7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
USPL1Q5W0Q7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
USPL1Q5W0Q7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
USPL1Q5W0Q7 DRD5P2-201ENST00000421395 2012 ntBASIC30.75■■■□□ 2.51
USPL1Q5W0Q7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
USPL1Q5W0Q7 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.75■■■□□ 2.51
USPL1Q5W0Q7 AC022616.5-201ENST00000518796 181 ntBASIC30.75■■■□□ 2.51
USPL1Q5W0Q7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC30.75■■■□□ 2.51
USPL1Q5W0Q7 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.75■■■□□ 2.51
USPL1Q5W0Q7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
USPL1Q5W0Q7 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
USPL1Q5W0Q7 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.74■■■□□ 2.51
USPL1Q5W0Q7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
USPL1Q5W0Q7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC30.74■■■□□ 2.51
USPL1Q5W0Q7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.73■■■□□ 2.51
USPL1Q5W0Q7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
USPL1Q5W0Q7 AL449106.1-201ENST00000608517 1980 ntBASIC30.73■■■□□ 2.51
USPL1Q5W0Q7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
USPL1Q5W0Q7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
USPL1Q5W0Q7 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC30.73■■■□□ 2.51
USPL1Q5W0Q7 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
USPL1Q5W0Q7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
USPL1Q5W0Q7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
USPL1Q5W0Q7 KRT16P3-201ENST00000439127 1283 ntBASIC30.72■■■□□ 2.51
USPL1Q5W0Q7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC30.72■■■□□ 2.51
USPL1Q5W0Q7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.72■■■□□ 2.51
USPL1Q5W0Q7 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
USPL1Q5W0Q7 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
USPL1Q5W0Q7 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC30.72■■■□□ 2.51
USPL1Q5W0Q7 KRT18P24-201ENST00000344739 1156 ntBASIC30.71■■■□□ 2.51
USPL1Q5W0Q7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
USPL1Q5W0Q7 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
USPL1Q5W0Q7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
USPL1Q5W0Q7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC30.7■■■□□ 2.51
USPL1Q5W0Q7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.5
USPL1Q5W0Q7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
USPL1Q5W0Q7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
USPL1Q5W0Q7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
USPL1Q5W0Q7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.68■■■□□ 2.5
USPL1Q5W0Q7 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.68■■■□□ 2.5
USPL1Q5W0Q7 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
USPL1Q5W0Q7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
USPL1Q5W0Q7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
USPL1Q5W0Q7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC30.67■■■□□ 2.5
USPL1Q5W0Q7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC30.67■■■□□ 2.5
USPL1Q5W0Q7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC30.67■■■□□ 2.5
USPL1Q5W0Q7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC30.67■■■□□ 2.5
USPL1Q5W0Q7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
USPL1Q5W0Q7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
USPL1Q5W0Q7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
USPL1Q5W0Q7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.66■■■□□ 2.5
USPL1Q5W0Q7 KRT18P10-201ENST00000388836 1287 ntBASIC30.66■■■□□ 2.5
USPL1Q5W0Q7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
USPL1Q5W0Q7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
USPL1Q5W0Q7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
USPL1Q5W0Q7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.65■■■□□ 2.5
USPL1Q5W0Q7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
USPL1Q5W0Q7 AC137630.3-201ENST00000607245 391 ntBASIC30.65■■■□□ 2.5
USPL1Q5W0Q7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
USPL1Q5W0Q7 TSPY9P-201ENST00000440215 945 ntBASIC30.64■■■□□ 2.5
USPL1Q5W0Q7 TSPY11P-201ENST00000442607 1045 ntBASIC30.64■■■□□ 2.5
USPL1Q5W0Q7 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.64■■■□□ 2.5
USPL1Q5W0Q7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
USPL1Q5W0Q7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
USPL1Q5W0Q7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.63■■■□□ 2.49
USPL1Q5W0Q7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC30.63■■■□□ 2.49
USPL1Q5W0Q7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
USPL1Q5W0Q7 AC120024.1-201ENST00000562672 995 ntBASIC30.62■■■□□ 2.49
USPL1Q5W0Q7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
USPL1Q5W0Q7 AC142086.6-201ENST00000621154 1765 ntBASIC30.61■■■□□ 2.49
USPL1Q5W0Q7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.61■■■□□ 2.49
USPL1Q5W0Q7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.61■■■□□ 2.49
USPL1Q5W0Q7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
USPL1Q5W0Q7 AC021242.3-201ENST00000607598 1377 ntBASIC30.61■■■□□ 2.49
USPL1Q5W0Q7 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
USPL1Q5W0Q7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
USPL1Q5W0Q7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
USPL1Q5W0Q7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.6■■■□□ 2.49
USPL1Q5W0Q7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.6■■■□□ 2.49
USPL1Q5W0Q7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
USPL1Q5W0Q7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
USPL1Q5W0Q7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
USPL1Q5W0Q7 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.58■■■□□ 2.49
USPL1Q5W0Q7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.58■■■□□ 2.49
USPL1Q5W0Q7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms