Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LINC01556Q5JQF7 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC16.36■□□□□ 0.21
LINC01556Q5JQF7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LINC01556Q5JQF7 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01556Q5JQF7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01556Q5JQF7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01556Q5JQF7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LINC01556Q5JQF7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LINC01556Q5JQF7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01556Q5JQF7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01556Q5JQF7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01556Q5JQF7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LINC01556Q5JQF7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01556Q5JQF7 MIR6765-201ENST00000614092 87 ntBASIC16.34■□□□□ 0.21
LINC01556Q5JQF7 AC145676.1-201ENST00000514988 2004 ntBASIC16.34■□□□□ 0.21
LINC01556Q5JQF7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LINC01556Q5JQF7 AC091060.1-201ENST00000623524 1766 ntBASIC16.33■□□□□ 0.21
LINC01556Q5JQF7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LINC01556Q5JQF7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
LINC01556Q5JQF7 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LINC01556Q5JQF7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01556Q5JQF7 DUX4L9-201ENST00000449051 1259 ntBASIC16.33■□□□□ 0.2
LINC01556Q5JQF7 AC012354.3-201ENST00000623734 483 ntBASIC16.33■□□□□ 0.2
LINC01556Q5JQF7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01556Q5JQF7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC01556Q5JQF7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01556Q5JQF7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC01556Q5JQF7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC01556Q5JQF7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01556Q5JQF7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01556Q5JQF7 DUSP8P4-201ENST00000399538 1761 ntBASIC16.33■□□□□ 0.2
LINC01556Q5JQF7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01556Q5JQF7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01556Q5JQF7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01556Q5JQF7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01556Q5JQF7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC01556Q5JQF7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC01556Q5JQF7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LINC01556Q5JQF7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LINC01556Q5JQF7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01556Q5JQF7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01556Q5JQF7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC01556Q5JQF7 SPCS2P3-201ENST00000500401 656 ntBASIC16.31■□□□□ 0.2
LINC01556Q5JQF7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC01556Q5JQF7 ERN1-208ENST00000606895 2068 ntBASIC16.31■□□□□ 0.2
LINC01556Q5JQF7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC01556Q5JQF7 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01556Q5JQF7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC01556Q5JQF7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01556Q5JQF7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01556Q5JQF7 TSPY13P-201ENST00000338964 914 ntBASIC16.3■□□□□ 0.2
LINC01556Q5JQF7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01556Q5JQF7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01556Q5JQF7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01556Q5JQF7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01556Q5JQF7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01556Q5JQF7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC16.29■□□□□ 0.2
LINC01556Q5JQF7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC01556Q5JQF7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01556Q5JQF7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC16.29■□□□□ 0.2
LINC01556Q5JQF7 ATP5G2P3-201ENST00000429083 425 ntBASIC16.29■□□□□ 0.2
LINC01556Q5JQF7 HYI-210ENST00000486909 905 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC01556Q5JQF7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.29■□□□□ 0.2
LINC01556Q5JQF7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC01556Q5JQF7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC16.29■□□□□ 0.2
LINC01556Q5JQF7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LINC01556Q5JQF7 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC16.29■□□□□ 0.2
LINC01556Q5JQF7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01556Q5JQF7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01556Q5JQF7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01556Q5JQF7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.28■□□□□ 0.2
LINC01556Q5JQF7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01556Q5JQF7 AC004987.1-201ENST00000428627 508 ntBASIC16.28■□□□□ 0.2
LINC01556Q5JQF7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
LINC01556Q5JQF7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
LINC01556Q5JQF7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
LINC01556Q5JQF7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
LINC01556Q5JQF7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
LINC01556Q5JQF7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01556Q5JQF7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01556Q5JQF7 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01556Q5JQF7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
LINC01556Q5JQF7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
LINC01556Q5JQF7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC16.27■□□□□ 0.19
LINC01556Q5JQF7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
LINC01556Q5JQF7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01556Q5JQF7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01556Q5JQF7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01556Q5JQF7 AC096887.2-201ENST00000623443 1957 ntBASIC16.26■□□□□ 0.19
LINC01556Q5JQF7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01556Q5JQF7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01556Q5JQF7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
LINC01556Q5JQF7 RPS2P7-201ENST00000447334 885 ntBASIC16.26■□□□□ 0.19
LINC01556Q5JQF7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01556Q5JQF7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC16.26■□□□□ 0.19
LINC01556Q5JQF7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01556Q5JQF7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC01556Q5JQF7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
LINC01556Q5JQF7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LINC01556Q5JQF7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms