Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCGF3Q3KNV8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCGF3Q3KNV8 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
PCGF3Q3KNV8 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.07■□□□□ 0.96
PCGF3Q3KNV8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCGF3Q3KNV8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCGF3Q3KNV8 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCGF3Q3KNV8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCGF3Q3KNV8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.07■□□□□ 0.96
PCGF3Q3KNV8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.06■□□□□ 0.96
PCGF3Q3KNV8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.06■□□□□ 0.96
PCGF3Q3KNV8 AL157400.5-201ENST00000507624 621 ntBASIC21.06■□□□□ 0.96
PCGF3Q3KNV8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.06■□□□□ 0.96
PCGF3Q3KNV8 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCGF3Q3KNV8 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCGF3Q3KNV8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCGF3Q3KNV8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCGF3Q3KNV8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCGF3Q3KNV8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.04■□□□□ 0.96
PCGF3Q3KNV8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.04■□□□□ 0.96
PCGF3Q3KNV8 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCGF3Q3KNV8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
PCGF3Q3KNV8 WHAMMP3-201ENST00000611636 1609 ntBASIC21.04■□□□□ 0.96
PCGF3Q3KNV8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.04■□□□□ 0.96
PCGF3Q3KNV8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCGF3Q3KNV8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.04■□□□□ 0.96
PCGF3Q3KNV8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCGF3Q3KNV8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.04■□□□□ 0.96
PCGF3Q3KNV8 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCGF3Q3KNV8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCGF3Q3KNV8 ERN1-208ENST00000606895 2068 ntBASIC21.03■□□□□ 0.96
PCGF3Q3KNV8 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCGF3Q3KNV8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
PCGF3Q3KNV8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.03■□□□□ 0.96
PCGF3Q3KNV8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.02■□□□□ 0.96
PCGF3Q3KNV8 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC21.02■□□□□ 0.96
PCGF3Q3KNV8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCGF3Q3KNV8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCGF3Q3KNV8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCGF3Q3KNV8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.01■□□□□ 0.95
PCGF3Q3KNV8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCGF3Q3KNV8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCGF3Q3KNV8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PCGF3Q3KNV8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PCGF3Q3KNV8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21■□□□□ 0.95
PCGF3Q3KNV8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21■□□□□ 0.95
PCGF3Q3KNV8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21■□□□□ 0.95
PCGF3Q3KNV8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21■□□□□ 0.95
PCGF3Q3KNV8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21■□□□□ 0.95
PCGF3Q3KNV8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
PCGF3Q3KNV8 SMPD5-203ENST00000639008 1464 ntBASIC21■□□□□ 0.95
PCGF3Q3KNV8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCGF3Q3KNV8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.99■□□□□ 0.95
PCGF3Q3KNV8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCGF3Q3KNV8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCGF3Q3KNV8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCGF3Q3KNV8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCGF3Q3KNV8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PCGF3Q3KNV8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PCGF3Q3KNV8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PCGF3Q3KNV8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCGF3Q3KNV8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PCGF3Q3KNV8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.98■□□□□ 0.95
PCGF3Q3KNV8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PCGF3Q3KNV8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.97■□□□□ 0.95
PCGF3Q3KNV8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PCGF3Q3KNV8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCGF3Q3KNV8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.97■□□□□ 0.95
PCGF3Q3KNV8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCGF3Q3KNV8 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PCGF3Q3KNV8 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCGF3Q3KNV8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCGF3Q3KNV8 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCGF3Q3KNV8 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PCGF3Q3KNV8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.96■□□□□ 0.95
PCGF3Q3KNV8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCGF3Q3KNV8 AC007029.1-201ENST00000604183 313 ntBASIC20.96■□□□□ 0.95
PCGF3Q3KNV8 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCGF3Q3KNV8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PCGF3Q3KNV8 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
PCGF3Q3KNV8 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.95■□□□□ 0.94
PCGF3Q3KNV8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCGF3Q3KNV8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.95■□□□□ 0.94
PCGF3Q3KNV8 AC025884.2-201ENST00000553429 711 ntBASIC20.95■□□□□ 0.94
PCGF3Q3KNV8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.95■□□□□ 0.94
PCGF3Q3KNV8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCGF3Q3KNV8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCGF3Q3KNV8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCGF3Q3KNV8 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCGF3Q3KNV8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCGF3Q3KNV8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.94■□□□□ 0.94
PCGF3Q3KNV8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCGF3Q3KNV8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCGF3Q3KNV8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCGF3Q3KNV8 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.94■□□□□ 0.94
PCGF3Q3KNV8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.94■□□□□ 0.94
PCGF3Q3KNV8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.94■□□□□ 0.94
PCGF3Q3KNV8 NTF6A-201ENST00000591175 560 ntBASIC20.94■□□□□ 0.94
PCGF3Q3KNV8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PCGF3Q3KNV8 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms