Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.87■□□□□ 0.93
TBC1D28Q2M2D7 KRT18P60-201ENST00000312876 1297 ntBASIC20.87■□□□□ 0.93
TBC1D28Q2M2D7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.87■□□□□ 0.93
TBC1D28Q2M2D7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D28Q2M2D7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TBC1D28Q2M2D7 AC018755.3-202ENST00000596210 929 ntBASIC20.87■□□□□ 0.93
TBC1D28Q2M2D7 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TBC1D28Q2M2D7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
TBC1D28Q2M2D7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TBC1D28Q2M2D7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
TBC1D28Q2M2D7 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D28Q2M2D7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.86■□□□□ 0.93
TBC1D28Q2M2D7 ERN1-208ENST00000606895 2068 ntBASIC20.86■□□□□ 0.93
TBC1D28Q2M2D7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TBC1D28Q2M2D7 KRT18P10-201ENST00000388836 1287 ntBASIC20.86■□□□□ 0.93
TBC1D28Q2M2D7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.86■□□□□ 0.93
TBC1D28Q2M2D7 DUSP8P4-201ENST00000399538 1761 ntBASIC20.85■□□□□ 0.93
TBC1D28Q2M2D7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D28Q2M2D7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D28Q2M2D7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D28Q2M2D7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D28Q2M2D7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D28Q2M2D7 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TBC1D28Q2M2D7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
TBC1D28Q2M2D7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TBC1D28Q2M2D7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D28Q2M2D7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TBC1D28Q2M2D7 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TBC1D28Q2M2D7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TBC1D28Q2M2D7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TBC1D28Q2M2D7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TBC1D28Q2M2D7 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TBC1D28Q2M2D7 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TBC1D28Q2M2D7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.84■□□□□ 0.93
TBC1D28Q2M2D7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TBC1D28Q2M2D7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
TBC1D28Q2M2D7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TBC1D28Q2M2D7 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TBC1D28Q2M2D7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TBC1D28Q2M2D7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.83■□□□□ 0.93
TBC1D28Q2M2D7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TBC1D28Q2M2D7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.83■□□□□ 0.93
TBC1D28Q2M2D7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.83■□□□□ 0.93
TBC1D28Q2M2D7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TBC1D28Q2M2D7 AC129492.7-201ENST00000622992 756 ntBASIC20.83■□□□□ 0.93
TBC1D28Q2M2D7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.83■□□□□ 0.93
TBC1D28Q2M2D7 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
TBC1D28Q2M2D7 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TBC1D28Q2M2D7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
TBC1D28Q2M2D7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TBC1D28Q2M2D7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TBC1D28Q2M2D7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TBC1D28Q2M2D7 MIR6765-201ENST00000614092 87 ntBASIC20.82■□□□□ 0.92
TBC1D28Q2M2D7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.82■□□□□ 0.92
TBC1D28Q2M2D7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.82■□□□□ 0.92
TBC1D28Q2M2D7 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TBC1D28Q2M2D7 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.81■□□□□ 0.92
TBC1D28Q2M2D7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TBC1D28Q2M2D7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TBC1D28Q2M2D7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TBC1D28Q2M2D7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TBC1D28Q2M2D7 DUX4L9-201ENST00000449051 1259 ntBASIC20.81■□□□□ 0.92
TBC1D28Q2M2D7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TBC1D28Q2M2D7 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TBC1D28Q2M2D7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TBC1D28Q2M2D7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.81■□□□□ 0.92
TBC1D28Q2M2D7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.8■□□□□ 0.92
TBC1D28Q2M2D7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D28Q2M2D7 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D28Q2M2D7 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D28Q2M2D7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.8■□□□□ 0.92
TBC1D28Q2M2D7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D28Q2M2D7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.8■□□□□ 0.92
TBC1D28Q2M2D7 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D28Q2M2D7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TBC1D28Q2M2D7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TBC1D28Q2M2D7 SPCS2P3-201ENST00000500401 656 ntBASIC20.79■□□□□ 0.92
TBC1D28Q2M2D7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TBC1D28Q2M2D7 AC012354.3-201ENST00000623734 483 ntBASIC20.79■□□□□ 0.92
TBC1D28Q2M2D7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.78■□□□□ 0.92
TBC1D28Q2M2D7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TBC1D28Q2M2D7 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.78■□□□□ 0.92
TBC1D28Q2M2D7 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.78■□□□□ 0.92
TBC1D28Q2M2D7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
TBC1D28Q2M2D7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D28Q2M2D7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.77■□□□□ 0.92
TBC1D28Q2M2D7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TBC1D28Q2M2D7 AC096887.2-201ENST00000623443 1957 ntBASIC20.77■□□□□ 0.92
TBC1D28Q2M2D7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TBC1D28Q2M2D7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D28Q2M2D7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TBC1D28Q2M2D7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D28Q2M2D7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D28Q2M2D7 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TBC1D28Q2M2D7 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TBC1D28Q2M2D7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TBC1D28Q2M2D7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TBC1D28Q2M2D7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.75■□□□□ 0.91
TBC1D28Q2M2D7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TBC1D28Q2M2D7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms