Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.72■■□□□ 1.07
RPS4XP62701 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPS4XP62701 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPS4XP62701 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPS4XP62701 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
RPS4XP62701 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.72■■□□□ 1.07
RPS4XP62701 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RPS4XP62701 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
RPS4XP62701 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RPS4XP62701 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RPS4XP62701 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.71■■□□□ 1.07
RPS4XP62701 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RPS4XP62701 AC060814.1-201ENST00000554326 538 ntBASIC21.71■■□□□ 1.07
RPS4XP62701 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.71■■□□□ 1.07
RPS4XP62701 AC012354.3-201ENST00000623734 483 ntBASIC21.71■■□□□ 1.07
RPS4XP62701 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RPS4XP62701 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.71■■□□□ 1.07
RPS4XP62701 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.71■■□□□ 1.07
RPS4XP62701 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.07
RPS4XP62701 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RPS4XP62701 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
RPS4XP62701 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.7■■□□□ 1.06
RPS4XP62701 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPS4XP62701 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
RPS4XP62701 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.7■■□□□ 1.06
RPS4XP62701 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.7■■□□□ 1.06
RPS4XP62701 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPS4XP62701 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
RPS4XP62701 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.7■■□□□ 1.06
RPS4XP62701 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPS4XP62701 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
RPS4XP62701 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RPS4XP62701 AC025884.2-201ENST00000553429 711 ntBASIC21.69■■□□□ 1.06
RPS4XP62701 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RPS4XP62701 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.69■■□□□ 1.06
RPS4XP62701 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.68■■□□□ 1.06
RPS4XP62701 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.68■■□□□ 1.06
RPS4XP62701 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RPS4XP62701 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
RPS4XP62701 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPS4XP62701 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPS4XP62701 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPS4XP62701 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.67■■□□□ 1.06
RPS4XP62701 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPS4XP62701 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RPS4XP62701 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPS4XP62701 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.67■■□□□ 1.06
RPS4XP62701 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RPS4XP62701 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPS4XP62701 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPS4XP62701 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPS4XP62701 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.66■■□□□ 1.06
RPS4XP62701 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RPS4XP62701 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RPS4XP62701 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.66■■□□□ 1.06
RPS4XP62701 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPS4XP62701 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPS4XP62701 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RPS4XP62701 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPS4XP62701 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPS4XP62701 AC142381.3-201ENST00000568208 1670 ntBASIC21.65■■□□□ 1.06
RPS4XP62701 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RPS4XP62701 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPS4XP62701 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPS4XP62701 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.65■■□□□ 1.06
RPS4XP62701 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RPS4XP62701 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
RPS4XP62701 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.64■■□□□ 1.05
RPS4XP62701 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.64■■□□□ 1.05
RPS4XP62701 AC092296.2-201ENST00000589470 999 ntBASIC21.64■■□□□ 1.05
RPS4XP62701 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RPS4XP62701 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPS4XP62701 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPS4XP62701 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.63■■□□□ 1.05
RPS4XP62701 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPS4XP62701 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.63■■□□□ 1.05
RPS4XP62701 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPS4XP62701 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPS4XP62701 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPS4XP62701 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.62■■□□□ 1.05
RPS4XP62701 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPS4XP62701 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.62■■□□□ 1.05
RPS4XP62701 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPS4XP62701 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPS4XP62701 AC022211.4-201ENST00000625094 2161 ntBASIC21.61■■□□□ 1.05
RPS4XP62701 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.61■■□□□ 1.05
RPS4XP62701 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPS4XP62701 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPS4XP62701 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.61■■□□□ 1.05
RPS4XP62701 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RPS4XP62701 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.6■■□□□ 1.05
RPS4XP62701 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RPS4XP62701 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
RPS4XP62701 MIR3960-201ENST00000583311 91 ntBASIC21.6■■□□□ 1.05
RPS4XP62701 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RPS4XP62701 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RPS4XP62701 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.6■■□□□ 1.05
RPS4XP62701 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPS4XP62701 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPS4XP62701 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms