Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
RAB5BP61020 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RAB5BP61020 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB5BP61020 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC18.89■□□□□ 0.61
RAB5BP61020 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RAB5BP61020 MVK-208ENST00000539696 608 ntTSL 5 BASIC18.89■□□□□ 0.61
RAB5BP61020 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
RAB5BP61020 ABCB10P4-201ENST00000566803 2184 ntBASIC18.89■□□□□ 0.61
RAB5BP61020 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB5BP61020 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB5BP61020 LINC00565-201ENST00000562710 2331 ntBASIC18.88■□□□□ 0.61
RAB5BP61020 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB5BP61020 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB5BP61020 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RAB5BP61020 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RAB5BP61020 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RAB5BP61020 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.88■□□□□ 0.61
RAB5BP61020 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB5BP61020 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB5BP61020 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RAB5BP61020 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RAB5BP61020 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB5BP61020 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
RAB5BP61020 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.86■□□□□ 0.61
RAB5BP61020 AP004833.2-201ENST00000532228 1454 ntBASIC18.86■□□□□ 0.61
RAB5BP61020 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RAB5BP61020 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RAB5BP61020 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB5BP61020 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB5BP61020 C1orf229-201ENST00000623686 2258 ntBASIC18.85■□□□□ 0.61
RAB5BP61020 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RAB5BP61020 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RAB5BP61020 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
RAB5BP61020 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.85■□□□□ 0.61
RAB5BP61020 AC015813.7-201ENST00000623294 581 ntBASIC18.85■□□□□ 0.61
RAB5BP61020 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RAB5BP61020 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
RAB5BP61020 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB5BP61020 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RAB5BP61020 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB5BP61020 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RAB5BP61020 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB5BP61020 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB5BP61020 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB5BP61020 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB5BP61020 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.84■□□□□ 0.61
RAB5BP61020 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RAB5BP61020 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RAB5BP61020 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RAB5BP61020 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.83■□□□□ 0.61
RAB5BP61020 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB5BP61020 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB5BP61020 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB5BP61020 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RAB5BP61020 WHAMMP3-201ENST00000611636 1609 ntBASIC18.83■□□□□ 0.61
RAB5BP61020 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RAB5BP61020 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB5BP61020 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB5BP61020 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RAB5BP61020 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.83■□□□□ 0.6
RAB5BP61020 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB5BP61020 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
RAB5BP61020 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB5BP61020 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB5BP61020 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
RAB5BP61020 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
RAB5BP61020 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB5BP61020 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB5BP61020 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB5BP61020 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
RAB5BP61020 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB5BP61020 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB5BP61020 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB5BP61020 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB5BP61020 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RAB5BP61020 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.81■□□□□ 0.6
RAB5BP61020 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RAB5BP61020 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB5BP61020 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
RAB5BP61020 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
RAB5BP61020 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RAB5BP61020 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC18.8■□□□□ 0.6
RAB5BP61020 AC022211.4-201ENST00000625094 2161 ntBASIC18.8■□□□□ 0.6
RAB5BP61020 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB5BP61020 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RAB5BP61020 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.8■□□□□ 0.6
RAB5BP61020 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB5BP61020 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RAB5BP61020 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB5BP61020 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB5BP61020 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB5BP61020 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RAB5BP61020 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.79■□□□□ 0.6
RAB5BP61020 INO80B-203ENST00000409917 796 ntTSL 2 BASIC18.79■□□□□ 0.6
RAB5BP61020 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RAB5BP61020 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RAB5BP61020 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RAB5BP61020 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RAB5BP61020 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.78■□□□□ 0.6
RAB5BP61020 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms