Protein–RNA interactions for Protein: P60842

EIF4A1, Eukaryotic initiation factor 4A-I, humanhuman

Known RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1P60842 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
EIF4A1P60842 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
EIF4A1P60842 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
EIF4A1P60842 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
EIF4A1P60842 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
EIF4A1P60842 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
EIF4A1P60842 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
EIF4A1P60842 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
EIF4A1P60842 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
EIF4A1P60842 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
EIF4A1P60842 AC103724.3-201ENST00000564481 992 ntBASIC31.12■■■□□ 2.57
EIF4A1P60842 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
EIF4A1P60842 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.12■■■□□ 2.57
EIF4A1P60842 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
EIF4A1P60842 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
EIF4A1P60842 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.11■■■□□ 2.57
EIF4A1P60842 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
EIF4A1P60842 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC31.11■■■□□ 2.57
EIF4A1P60842 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.11■■■□□ 2.57
EIF4A1P60842 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.11■■■□□ 2.57
EIF4A1P60842 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.1■■■□□ 2.57
EIF4A1P60842 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
EIF4A1P60842 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.09■■■□□ 2.57
EIF4A1P60842 KRT18P10-201ENST00000388836 1287 ntBASIC31.09■■■□□ 2.57
EIF4A1P60842 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
EIF4A1P60842 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC31.08■■■□□ 2.57
EIF4A1P60842 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.08■■■□□ 2.57
EIF4A1P60842 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
EIF4A1P60842 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
EIF4A1P60842 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
EIF4A1P60842 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC31.07■■■□□ 2.56
EIF4A1P60842 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
EIF4A1P60842 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
EIF4A1P60842 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
EIF4A1P60842 AC009299.2-201ENST00000482477 511 ntBASIC31.06■■■□□ 2.56
EIF4A1P60842 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.06■■■□□ 2.56
EIF4A1P60842 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.06■■■□□ 2.56
EIF4A1P60842 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
EIF4A1P60842 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
EIF4A1P60842 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
EIF4A1P60842 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC31.05■■■□□ 2.56
EIF4A1P60842 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
EIF4A1P60842 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
EIF4A1P60842 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
EIF4A1P60842 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.05■■■□□ 2.56
EIF4A1P60842 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
EIF4A1P60842 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
EIF4A1P60842 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
EIF4A1P60842 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
EIF4A1P60842 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
EIF4A1P60842 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
EIF4A1P60842 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC31.02■■■□□ 2.56
EIF4A1P60842 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.01■■■□□ 2.56
EIF4A1P60842 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
EIF4A1P60842 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.01■■■□□ 2.55
EIF4A1P60842 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
EIF4A1P60842 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
EIF4A1P60842 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
EIF4A1P60842 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC31■■■□□ 2.55
EIF4A1P60842 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31■■■□□ 2.55
EIF4A1P60842 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC31■■■□□ 2.55
EIF4A1P60842 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC30.99■■■□□ 2.55
EIF4A1P60842 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
EIF4A1P60842 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
EIF4A1P60842 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
EIF4A1P60842 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.99■■■□□ 2.55
EIF4A1P60842 AL031848.2-201ENST00000607670 837 ntBASIC30.99■■■□□ 2.55
EIF4A1P60842 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
EIF4A1P60842 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
EIF4A1P60842 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
EIF4A1P60842 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
EIF4A1P60842 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC30.99■■■□□ 2.55
EIF4A1P60842 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC30.99■■■□□ 2.55
EIF4A1P60842 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
EIF4A1P60842 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
EIF4A1P60842 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
EIF4A1P60842 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.98■■■□□ 2.55
EIF4A1P60842 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
EIF4A1P60842 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
EIF4A1P60842 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
EIF4A1P60842 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
EIF4A1P60842 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC30.97■■■□□ 2.55
EIF4A1P60842 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC30.97■■■□□ 2.55
EIF4A1P60842 PKM-203ENST00000389093 2279 ntTSL 5 BASIC30.96■■■□□ 2.55
EIF4A1P60842 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.96■■■□□ 2.55
EIF4A1P60842 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
EIF4A1P60842 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
EIF4A1P60842 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
EIF4A1P60842 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
EIF4A1P60842 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
EIF4A1P60842 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
EIF4A1P60842 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
EIF4A1P60842 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
EIF4A1P60842 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
EIF4A1P60842 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.94■■■□□ 2.54
EIF4A1P60842 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
EIF4A1P60842 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.94■■■□□ 2.54
EIF4A1P60842 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.94■■■□□ 2.54
EIF4A1P60842 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30.93■■■□□ 2.54
EIF4A1P60842 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC30.93■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms