Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXG1P55316 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXG1P55316 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
FOXG1P55316 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXG1P55316 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXG1P55316 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXG1P55316 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.19■□□□□ 0.98
FOXG1P55316 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
FOXG1P55316 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.19■□□□□ 0.98
FOXG1P55316 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
FOXG1P55316 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
FOXG1P55316 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
FOXG1P55316 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.18■□□□□ 0.98
FOXG1P55316 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
FOXG1P55316 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.18■□□□□ 0.98
FOXG1P55316 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FOXG1P55316 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXG1P55316 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXG1P55316 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.17■□□□□ 0.98
FOXG1P55316 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.17■□□□□ 0.98
FOXG1P55316 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXG1P55316 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FOXG1P55316 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
FOXG1P55316 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
FOXG1P55316 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
FOXG1P55316 AC092803.2-201ENST00000564287 1899 ntBASIC21.16■□□□□ 0.98
FOXG1P55316 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC21.16■□□□□ 0.98
FOXG1P55316 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXG1P55316 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.16■□□□□ 0.98
FOXG1P55316 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.16■□□□□ 0.98
FOXG1P55316 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXG1P55316 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
FOXG1P55316 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXG1P55316 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXG1P55316 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.15■□□□□ 0.98
FOXG1P55316 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.15■□□□□ 0.98
FOXG1P55316 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
FOXG1P55316 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
FOXG1P55316 AC091060.1-201ENST00000623524 1766 ntBASIC21.14■□□□□ 0.97
FOXG1P55316 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXG1P55316 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FOXG1P55316 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXG1P55316 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXG1P55316 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
FOXG1P55316 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
FOXG1P55316 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FOXG1P55316 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXG1P55316 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
FOXG1P55316 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
FOXG1P55316 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
FOXG1P55316 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXG1P55316 AC096887.2-201ENST00000623443 1957 ntBASIC21.12■□□□□ 0.97
FOXG1P55316 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXG1P55316 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.12■□□□□ 0.97
FOXG1P55316 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXG1P55316 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
FOXG1P55316 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.12■□□□□ 0.97
FOXG1P55316 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
FOXG1P55316 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.12■□□□□ 0.97
FOXG1P55316 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXG1P55316 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXG1P55316 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
FOXG1P55316 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXG1P55316 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.11■□□□□ 0.97
FOXG1P55316 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.11■□□□□ 0.97
FOXG1P55316 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.11■□□□□ 0.97
FOXG1P55316 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.11■□□□□ 0.97
FOXG1P55316 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
FOXG1P55316 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXG1P55316 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
FOXG1P55316 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
FOXG1P55316 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.1■□□□□ 0.97
FOXG1P55316 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
FOXG1P55316 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
FOXG1P55316 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXG1P55316 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
FOXG1P55316 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXG1P55316 AC010980.1-201ENST00000587192 1142 ntBASIC21.09■□□□□ 0.97
FOXG1P55316 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
FOXG1P55316 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
FOXG1P55316 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
FOXG1P55316 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXG1P55316 RPS2P7-201ENST00000447334 885 ntBASIC21.08■□□□□ 0.97
FOXG1P55316 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.08■□□□□ 0.97
FOXG1P55316 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
FOXG1P55316 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.08■□□□□ 0.97
FOXG1P55316 BHLHE23-202ENST00000612929 1109 ntBASIC21.08■□□□□ 0.97
FOXG1P55316 AC010501.1-201ENST00000606270 1962 ntBASIC21.08■□□□□ 0.96
FOXG1P55316 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
FOXG1P55316 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
FOXG1P55316 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
FOXG1P55316 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.07■□□□□ 0.96
FOXG1P55316 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXG1P55316 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
FOXG1P55316 PVT1_1.1-201ENST00000615125 194 ntBASIC21.07■□□□□ 0.96
FOXG1P55316 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
FOXG1P55316 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
FOXG1P55316 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
FOXG1P55316 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.06■□□□□ 0.96
FOXG1P55316 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms