Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC22■■□□□ 1.11
HMGA2P52926 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22■■□□□ 1.11
HMGA2P52926 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HMGA2P52926 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
HMGA2P52926 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22■■□□□ 1.11
HMGA2P52926 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22■■□□□ 1.11
HMGA2P52926 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGA2P52926 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGA2P52926 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGA2P52926 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGA2P52926 AC097639.1-201ENST00000565519 1891 ntBASIC21.99■■□□□ 1.11
HMGA2P52926 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGA2P52926 DUX4L11-201ENST00000611504 1267 ntBASIC21.99■■□□□ 1.11
HMGA2P52926 DUX4L12-201ENST00000614593 1267 ntBASIC21.99■■□□□ 1.11
HMGA2P52926 DUX4L14-201ENST00000621227 1267 ntBASIC21.99■■□□□ 1.11
HMGA2P52926 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.99■■□□□ 1.11
HMGA2P52926 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HMGA2P52926 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HMGA2P52926 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGA2P52926 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HMGA2P52926 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
HMGA2P52926 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HMGA2P52926 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGA2P52926 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGA2P52926 HLA-V-202ENST00000446817 847 ntBASIC21.98■■□□□ 1.11
HMGA2P52926 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HMGA2P52926 SLC6A10P-202ENST00000431994 2058 ntBASIC21.98■■□□□ 1.11
HMGA2P52926 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
HMGA2P52926 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.98■■□□□ 1.11
HMGA2P52926 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
HMGA2P52926 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGA2P52926 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGA2P52926 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.97■■□□□ 1.11
HMGA2P52926 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.97■■□□□ 1.11
HMGA2P52926 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
HMGA2P52926 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
HMGA2P52926 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.97■■□□□ 1.11
HMGA2P52926 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
HMGA2P52926 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
HMGA2P52926 MED25-210ENST00000612854 801 ntTSL 5 BASIC21.96■■□□□ 1.11
HMGA2P52926 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
HMGA2P52926 MED25-214ENST00000622402 642 ntTSL 5 BASIC21.96■■□□□ 1.11
HMGA2P52926 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGA2P52926 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGA2P52926 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGA2P52926 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HMGA2P52926 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.96■■□□□ 1.11
HMGA2P52926 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGA2P52926 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
HMGA2P52926 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGA2P52926 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.95■■□□□ 1.1
HMGA2P52926 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGA2P52926 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGA2P52926 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGA2P52926 LINC01124-201ENST00000409786 2117 ntBASIC21.95■■□□□ 1.1
HMGA2P52926 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGA2P52926 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HMGA2P52926 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
HMGA2P52926 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMGA2P52926 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.94■■□□□ 1.1
HMGA2P52926 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.94■■□□□ 1.1
HMGA2P52926 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMGA2P52926 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
HMGA2P52926 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMGA2P52926 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMGA2P52926 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.94■■□□□ 1.1
HMGA2P52926 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HMGA2P52926 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HMGA2P52926 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HMGA2P52926 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HMGA2P52926 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMGA2P52926 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HMGA2P52926 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMGA2P52926 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
HMGA2P52926 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
HMGA2P52926 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HMGA2P52926 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
HMGA2P52926 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
HMGA2P52926 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMGA2P52926 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HMGA2P52926 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.92■■□□□ 1.1
HMGA2P52926 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HMGA2P52926 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
HMGA2P52926 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.91■■□□□ 1.1
HMGA2P52926 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HMGA2P52926 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HMGA2P52926 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
HMGA2P52926 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
HMGA2P52926 LINC00543-201ENST00000567234 1845 ntBASIC21.9■■□□□ 1.1
HMGA2P52926 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.9■■□□□ 1.1
HMGA2P52926 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HMGA2P52926 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.9■■□□□ 1.1
HMGA2P52926 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.1
HMGA2P52926 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HMGA2P52926 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGA2P52926 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGA2P52926 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HMGA2P52926 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HMGA2P52926 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
HMGA2P52926 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms