Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLCNKAP51800 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.63■■□□□ 1.37
CLCNKAP51800 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.63■■□□□ 1.37
CLCNKAP51800 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CLCNKAP51800 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCNKAP51800 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCNKAP51800 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCNKAP51800 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCNKAP51800 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCNKAP51800 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.62■■□□□ 1.37
CLCNKAP51800 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLCNKAP51800 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC23.62■■□□□ 1.37
CLCNKAP51800 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.62■■□□□ 1.37
CLCNKAP51800 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLCNKAP51800 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
CLCNKAP51800 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLCNKAP51800 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CLCNKAP51800 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLCNKAP51800 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.61■■□□□ 1.37
CLCNKAP51800 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CLCNKAP51800 AC087393.1-201ENST00000582896 145 ntBASIC23.61■■□□□ 1.37
CLCNKAP51800 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CLCNKAP51800 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLCNKAP51800 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.6■■□□□ 1.37
CLCNKAP51800 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.6■■□□□ 1.37
CLCNKAP51800 AC139795.1-202ENST00000500444 432 ntBASIC23.6■■□□□ 1.37
CLCNKAP51800 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CLCNKAP51800 RPS2P7-201ENST00000447334 885 ntBASIC23.59■■□□□ 1.37
CLCNKAP51800 BHLHE23-202ENST00000612929 1109 ntBASIC23.59■■□□□ 1.37
CLCNKAP51800 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CLCNKAP51800 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC23.59■■□□□ 1.37
CLCNKAP51800 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
CLCNKAP51800 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLCNKAP51800 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CLCNKAP51800 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.58■■□□□ 1.36
CLCNKAP51800 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLCNKAP51800 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLCNKAP51800 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLCNKAP51800 MTX2-204ENST00000443241 799 ntTSL 3 BASIC23.57■■□□□ 1.36
CLCNKAP51800 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLCNKAP51800 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.57■■□□□ 1.36
CLCNKAP51800 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLCNKAP51800 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLCNKAP51800 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC23.57■■□□□ 1.36
CLCNKAP51800 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.56■■□□□ 1.36
CLCNKAP51800 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CLCNKAP51800 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CLCNKAP51800 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLCNKAP51800 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLCNKAP51800 AC019171.1-201ENST00000601251 1056 ntBASIC23.56■■□□□ 1.36
CLCNKAP51800 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.56■■□□□ 1.36
CLCNKAP51800 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CLCNKAP51800 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CLCNKAP51800 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CLCNKAP51800 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CLCNKAP51800 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLCNKAP51800 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CLCNKAP51800 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLCNKAP51800 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.54■■□□□ 1.36
CLCNKAP51800 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CLCNKAP51800 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CLCNKAP51800 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.54■■□□□ 1.36
CLCNKAP51800 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CLCNKAP51800 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.54■■□□□ 1.36
CLCNKAP51800 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CLCNKAP51800 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CLCNKAP51800 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.53■■□□□ 1.36
CLCNKAP51800 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.53■■□□□ 1.36
CLCNKAP51800 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CLCNKAP51800 AC010980.1-201ENST00000587192 1142 ntBASIC23.53■■□□□ 1.36
CLCNKAP51800 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CLCNKAP51800 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CLCNKAP51800 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CLCNKAP51800 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CLCNKAP51800 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CLCNKAP51800 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CLCNKAP51800 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.52■■□□□ 1.36
CLCNKAP51800 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CLCNKAP51800 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLCNKAP51800 PVT1_1.1-201ENST00000615125 194 ntBASIC23.51■■□□□ 1.35
CLCNKAP51800 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.51■■□□□ 1.35
CLCNKAP51800 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CLCNKAP51800 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
CLCNKAP51800 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.5■■□□□ 1.35
CLCNKAP51800 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
CLCNKAP51800 LONRF2P2-201ENST00000439212 571 ntBASIC23.5■■□□□ 1.35
CLCNKAP51800 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.5■■□□□ 1.35
CLCNKAP51800 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CLCNKAP51800 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CLCNKAP51800 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CLCNKAP51800 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.49■■□□□ 1.35
CLCNKAP51800 RARRES2P1-201ENST00000474487 481 ntBASIC23.49■■□□□ 1.35
CLCNKAP51800 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CLCNKAP51800 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
CLCNKAP51800 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.49■■□□□ 1.35
CLCNKAP51800 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CLCNKAP51800 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
CLCNKAP51800 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.48■■□□□ 1.35
CLCNKAP51800 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.48■■□□□ 1.35
CLCNKAP51800 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms