Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
PDE6BP35913 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
PDE6BP35913 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PDE6BP35913 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PDE6BP35913 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PDE6BP35913 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PDE6BP35913 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC30.14■■■□□ 2.42
PDE6BP35913 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PDE6BP35913 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC30.14■■■□□ 2.42
PDE6BP35913 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.42
PDE6BP35913 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PDE6BP35913 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC30.13■■■□□ 2.41
PDE6BP35913 AC092028.1-203ENST00000608262 953 ntBASIC30.13■■■□□ 2.41
PDE6BP35913 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC30.13■■■□□ 2.41
PDE6BP35913 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PDE6BP35913 NALT1-201ENST00000429224 738 ntTSL 5 BASIC30.12■■■□□ 2.41
PDE6BP35913 RALB-208ENST00000631312 311 ntTSL 5 BASIC30.12■■■□□ 2.41
PDE6BP35913 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PDE6BP35913 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PDE6BP35913 TRIR-202ENST00000588213 841 ntTSL 3 BASIC30.11■■■□□ 2.41
PDE6BP35913 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC30.1■■■□□ 2.41
PDE6BP35913 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PDE6BP35913 AC131281.2-201ENST00000520478 145 ntBASIC30.1■■■□□ 2.41
PDE6BP35913 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC30.1■■■□□ 2.41
PDE6BP35913 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PDE6BP35913 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
PDE6BP35913 RPP21-222ENST00000433076 577 ntTSL 2 BASIC30.09■■■□□ 2.41
PDE6BP35913 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.08■■■□□ 2.41
PDE6BP35913 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PDE6BP35913 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.08■■■□□ 2.41
PDE6BP35913 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC30.08■■■□□ 2.41
PDE6BP35913 SRR-208ENST00000576848 588 ntTSL 4 BASIC30.08■■■□□ 2.41
PDE6BP35913 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
PDE6BP35913 AL449106.1-201ENST00000608517 1980 ntBASIC30.08■■■□□ 2.41
PDE6BP35913 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
PDE6BP35913 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
PDE6BP35913 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC30.07■■■□□ 2.4
PDE6BP35913 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
PDE6BP35913 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
PDE6BP35913 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PDE6BP35913 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC30.06■■■□□ 2.4
PDE6BP35913 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
PDE6BP35913 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC30.06■■■□□ 2.4
PDE6BP35913 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
PDE6BP35913 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.05■■■□□ 2.4
PDE6BP35913 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
PDE6BP35913 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
PDE6BP35913 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.05■■■□□ 2.4
PDE6BP35913 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
PDE6BP35913 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
PDE6BP35913 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC30.04■■■□□ 2.4
PDE6BP35913 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC30.04■■■□□ 2.4
PDE6BP35913 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC30.04■■■□□ 2.4
PDE6BP35913 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PDE6BP35913 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
PDE6BP35913 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC30.03■■■□□ 2.4
PDE6BP35913 AL136116.3-201ENST00000402907 1138 ntBASIC30.02■■■□□ 2.4
PDE6BP35913 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC30.02■■■□□ 2.4
PDE6BP35913 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PDE6BP35913 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
PDE6BP35913 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC30.02■■■□□ 2.4
PDE6BP35913 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PDE6BP35913 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC30.01■■■□□ 2.39
PDE6BP35913 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
PDE6BP35913 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
PDE6BP35913 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC30■■■□□ 2.39
PDE6BP35913 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC30■■■□□ 2.39
PDE6BP35913 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30■■■□□ 2.39
PDE6BP35913 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
PDE6BP35913 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
PDE6BP35913 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.99■■■□□ 2.39
PDE6BP35913 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
PDE6BP35913 MIR4281-201ENST00000580852 62 ntBASIC29.99■■■□□ 2.39
PDE6BP35913 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC29.99■■■□□ 2.39
PDE6BP35913 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
PDE6BP35913 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
PDE6BP35913 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
PDE6BP35913 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
PDE6BP35913 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
PDE6BP35913 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
PDE6BP35913 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
PDE6BP35913 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
PDE6BP35913 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC29.98■■■□□ 2.39
PDE6BP35913 AL117332.1-201ENST00000622628 974 ntBASIC29.98■■■□□ 2.39
PDE6BP35913 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC29.98■■■□□ 2.39
PDE6BP35913 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC29.98■■■□□ 2.39
PDE6BP35913 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
PDE6BP35913 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC29.97■■■□□ 2.39
PDE6BP35913 AC010997.5-201ENST00000609182 354 ntBASIC29.97■■■□□ 2.39
PDE6BP35913 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
PDE6BP35913 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
PDE6BP35913 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
PDE6BP35913 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.96■■■□□ 2.39
PDE6BP35913 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC29.96■■■□□ 2.39
PDE6BP35913 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC29.96■■■□□ 2.39
PDE6BP35913 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PDE6BP35913 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC29.96■■■□□ 2.39
PDE6BP35913 ABCB10P1-201ENST00000614297 2181 ntBASIC29.96■■■□□ 2.39
PDE6BP35913 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
PDE6BP35913 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms