Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
COL11A2P13942 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
COL11A2P13942 AL449106.1-201ENST00000608517 1980 ntBASIC30.11■■■□□ 2.41
COL11A2P13942 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
COL11A2P13942 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC30.1■■■□□ 2.41
COL11A2P13942 TSPY9P-201ENST00000440215 945 ntBASIC30.1■■■□□ 2.41
COL11A2P13942 TSPY11P-201ENST00000442607 1045 ntBASIC30.1■■■□□ 2.41
COL11A2P13942 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC30.1■■■□□ 2.41
COL11A2P13942 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
COL11A2P13942 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
COL11A2P13942 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC30.09■■■□□ 2.41
COL11A2P13942 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC30.08■■■□□ 2.41
COL11A2P13942 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC30.08■■■□□ 2.41
COL11A2P13942 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC30.08■■■□□ 2.41
COL11A2P13942 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC30.08■■■□□ 2.41
COL11A2P13942 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
COL11A2P13942 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
COL11A2P13942 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC30.07■■■□□ 2.4
COL11A2P13942 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
COL11A2P13942 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
COL11A2P13942 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
COL11A2P13942 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
COL11A2P13942 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.06■■■□□ 2.4
COL11A2P13942 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
COL11A2P13942 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
COL11A2P13942 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
COL11A2P13942 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC30.06■■■□□ 2.4
COL11A2P13942 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC30.06■■■□□ 2.4
COL11A2P13942 AC120024.1-201ENST00000562672 995 ntBASIC30.06■■■□□ 2.4
COL11A2P13942 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC30.06■■■□□ 2.4
COL11A2P13942 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
COL11A2P13942 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC30.05■■■□□ 2.4
COL11A2P13942 AC110285.6-201ENST00000617652 491 ntBASIC30.05■■■□□ 2.4
COL11A2P13942 AL117332.1-201ENST00000622628 974 ntBASIC30.05■■■□□ 2.4
COL11A2P13942 RALB-208ENST00000631312 311 ntTSL 5 BASIC30.05■■■□□ 2.4
COL11A2P13942 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC30.05■■■□□ 2.4
COL11A2P13942 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC30.05■■■□□ 2.4
COL11A2P13942 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
COL11A2P13942 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
COL11A2P13942 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
COL11A2P13942 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
COL11A2P13942 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
COL11A2P13942 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL11A2P13942 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
COL11A2P13942 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC30.03■■■□□ 2.4
COL11A2P13942 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC30.03■■■□□ 2.4
COL11A2P13942 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
COL11A2P13942 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC30.02■■■□□ 2.4
COL11A2P13942 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
COL11A2P13942 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC30.02■■■□□ 2.4
COL11A2P13942 SENP5-202ENST00000419026 973 ntTSL 3 BASIC30.02■■■□□ 2.4
COL11A2P13942 SRR-208ENST00000576848 588 ntTSL 4 BASIC30.02■■■□□ 2.4
COL11A2P13942 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
COL11A2P13942 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
COL11A2P13942 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
COL11A2P13942 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
COL11A2P13942 AL139246.5-201ENST00000606645 996 ntBASIC30.01■■■□□ 2.39
COL11A2P13942 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
COL11A2P13942 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC30■■■□□ 2.39
COL11A2P13942 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC30■■■□□ 2.39
COL11A2P13942 ABCB10P1-201ENST00000614297 2181 ntBASIC30■■■□□ 2.39
COL11A2P13942 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
COL11A2P13942 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC29.99■■■□□ 2.39
COL11A2P13942 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC29.98■■■□□ 2.39
COL11A2P13942 NALT1-201ENST00000429224 738 ntTSL 5 BASIC29.98■■■□□ 2.39
COL11A2P13942 AC092028.1-203ENST00000608262 953 ntBASIC29.98■■■□□ 2.39
COL11A2P13942 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
COL11A2P13942 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC29.97■■■□□ 2.39
COL11A2P13942 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
COL11A2P13942 AL136116.3-201ENST00000402907 1138 ntBASIC29.97■■■□□ 2.39
COL11A2P13942 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC29.97■■■□□ 2.39
COL11A2P13942 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC29.97■■■□□ 2.39
COL11A2P13942 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
COL11A2P13942 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC29.97■■■□□ 2.39
COL11A2P13942 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
COL11A2P13942 KRT18P10-201ENST00000388836 1287 ntBASIC29.96■■■□□ 2.39
COL11A2P13942 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
COL11A2P13942 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC29.95■■■□□ 2.39
COL11A2P13942 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
COL11A2P13942 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC29.95■■■□□ 2.39
COL11A2P13942 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
COL11A2P13942 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.38
COL11A2P13942 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC29.95■■■□□ 2.38
COL11A2P13942 RPP21-222ENST00000433076 577 ntTSL 2 BASIC29.95■■■□□ 2.38
COL11A2P13942 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC29.95■■■□□ 2.38
COL11A2P13942 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
COL11A2P13942 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
COL11A2P13942 QDPR-206ENST00000508623 601 ntTSL 3 BASIC29.93■■■□□ 2.38
COL11A2P13942 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
COL11A2P13942 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
COL11A2P13942 AL512631.2-201ENST00000604634 923 ntBASIC29.93■■■□□ 2.38
COL11A2P13942 MIR4466-201ENST00000606121 54 ntBASIC29.93■■■□□ 2.38
COL11A2P13942 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
COL11A2P13942 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC29.92■■■□□ 2.38
COL11A2P13942 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC29.92■■■□□ 2.38
COL11A2P13942 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC29.92■■■□□ 2.38
COL11A2P13942 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC29.92■■■□□ 2.38
COL11A2P13942 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC29.91■■■□□ 2.38
COL11A2P13942 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
COL11A2P13942 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC29.91■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms