Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
GYPBP06028 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
GYPBP06028 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GYPBP06028 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GYPBP06028 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GYPBP06028 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
GYPBP06028 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GYPBP06028 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GYPBP06028 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
GYPBP06028 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.49■■□□□ 1.03
GYPBP06028 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.49■■□□□ 1.03
GYPBP06028 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.49■■□□□ 1.03
GYPBP06028 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
GYPBP06028 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GYPBP06028 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GYPBP06028 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GYPBP06028 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GYPBP06028 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GYPBP06028 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GYPBP06028 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GYPBP06028 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GYPBP06028 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GYPBP06028 MIR3648-2-201ENST00000581792 180 ntBASIC21.47■■□□□ 1.03
GYPBP06028 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
GYPBP06028 MIR3648-1-201ENST00000615959 180 ntBASIC21.47■■□□□ 1.03
GYPBP06028 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.47■■□□□ 1.03
GYPBP06028 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
GYPBP06028 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GYPBP06028 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GYPBP06028 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GYPBP06028 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.46■■□□□ 1.03
GYPBP06028 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.46■■□□□ 1.03
GYPBP06028 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GYPBP06028 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GYPBP06028 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.45■■□□□ 1.02
GYPBP06028 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.45■■□□□ 1.02
GYPBP06028 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.45■■□□□ 1.02
GYPBP06028 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.45■■□□□ 1.02
GYPBP06028 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.44■■□□□ 1.02
GYPBP06028 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GYPBP06028 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
GYPBP06028 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
GYPBP06028 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GYPBP06028 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.44■■□□□ 1.02
GYPBP06028 AC126177.7-201ENST00000547904 679 ntBASIC21.44■■□□□ 1.02
GYPBP06028 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
GYPBP06028 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GYPBP06028 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GYPBP06028 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GYPBP06028 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.43■■□□□ 1.02
GYPBP06028 AL139125.2-201ENST00000623134 1869 ntBASIC21.43■■□□□ 1.02
GYPBP06028 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.43■■□□□ 1.02
GYPBP06028 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GYPBP06028 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GYPBP06028 AC016575.1-201ENST00000607026 382 ntBASIC21.43■■□□□ 1.02
GYPBP06028 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
GYPBP06028 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GYPBP06028 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
GYPBP06028 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GYPBP06028 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
GYPBP06028 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GYPBP06028 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.41■■□□□ 1.02
GYPBP06028 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GYPBP06028 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.4■■□□□ 1.02
GYPBP06028 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
GYPBP06028 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
GYPBP06028 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GYPBP06028 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.4■■□□□ 1.02
GYPBP06028 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GYPBP06028 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GYPBP06028 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.39■■□□□ 1.02
GYPBP06028 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
GYPBP06028 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GYPBP06028 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.39■■□□□ 1.01
GYPBP06028 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
GYPBP06028 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
GYPBP06028 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
GYPBP06028 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GYPBP06028 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
GYPBP06028 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
GYPBP06028 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
GYPBP06028 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.38■■□□□ 1.01
GYPBP06028 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GYPBP06028 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GYPBP06028 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GYPBP06028 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GYPBP06028 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GYPBP06028 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GYPBP06028 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
GYPBP06028 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
GYPBP06028 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.37■■□□□ 1.01
GYPBP06028 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.37■■□□□ 1.01
GYPBP06028 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
GYPBP06028 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
GYPBP06028 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
GYPBP06028 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GYPBP06028 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
GYPBP06028 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
GYPBP06028 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
GYPBP06028 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms