Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.77
COL5A2P05997 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
COL5A2P05997 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC32.38■■■□□ 2.77
COL5A2P05997 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC32.38■■■□□ 2.77
COL5A2P05997 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC32.38■■■□□ 2.77
COL5A2P05997 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC32.38■■■□□ 2.77
COL5A2P05997 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC32.38■■■□□ 2.77
COL5A2P05997 AC120024.1-201ENST00000562672 995 ntBASIC32.38■■■□□ 2.77
COL5A2P05997 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
COL5A2P05997 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC32.38■■■□□ 2.77
COL5A2P05997 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC32.38■■■□□ 2.77
COL5A2P05997 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
COL5A2P05997 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
COL5A2P05997 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC32.37■■■□□ 2.77
COL5A2P05997 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
COL5A2P05997 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
COL5A2P05997 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
COL5A2P05997 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC32.36■■■□□ 2.77
COL5A2P05997 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC32.36■■■□□ 2.77
COL5A2P05997 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
COL5A2P05997 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC32.35■■■□□ 2.77
COL5A2P05997 RALB-208ENST00000631312 311 ntTSL 5 BASIC32.35■■■□□ 2.77
COL5A2P05997 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC32.35■■■□□ 2.77
COL5A2P05997 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC32.34■■■□□ 2.77
COL5A2P05997 AL449106.1-201ENST00000608517 1980 ntBASIC32.34■■■□□ 2.77
COL5A2P05997 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC32.34■■■□□ 2.77
COL5A2P05997 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC32.34■■■□□ 2.77
COL5A2P05997 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC32.33■■■□□ 2.77
COL5A2P05997 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC32.32■■■□□ 2.76
COL5A2P05997 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
COL5A2P05997 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
COL5A2P05997 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC32.31■■■□□ 2.76
COL5A2P05997 NALT1-201ENST00000429224 738 ntTSL 5 BASIC32.3■■■□□ 2.76
COL5A2P05997 AC092028.1-203ENST00000608262 953 ntBASIC32.3■■■□□ 2.76
COL5A2P05997 RPP21-222ENST00000433076 577 ntTSL 2 BASIC32.29■■■□□ 2.76
COL5A2P05997 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC32.29■■■□□ 2.76
COL5A2P05997 MIR4281-201ENST00000580852 62 ntBASIC32.29■■■□□ 2.76
COL5A2P05997 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC32.29■■■□□ 2.76
COL5A2P05997 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
COL5A2P05997 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC32.29■■■□□ 2.76
COL5A2P05997 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
COL5A2P05997 AL117332.1-201ENST00000622628 974 ntBASIC32.29■■■□□ 2.76
COL5A2P05997 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC32.28■■■□□ 2.76
COL5A2P05997 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
COL5A2P05997 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
COL5A2P05997 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
COL5A2P05997 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC32.28■■■□□ 2.76
COL5A2P05997 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC32.28■■■□□ 2.76
COL5A2P05997 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
COL5A2P05997 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
COL5A2P05997 SRR-208ENST00000576848 588 ntTSL 4 BASIC32.26■■■□□ 2.75
COL5A2P05997 AC110285.6-201ENST00000617652 491 ntBASIC32.26■■■□□ 2.75
COL5A2P05997 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
COL5A2P05997 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
COL5A2P05997 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC32.25■■■□□ 2.75
COL5A2P05997 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC32.25■■■□□ 2.75
COL5A2P05997 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC32.25■■■□□ 2.75
COL5A2P05997 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
COL5A2P05997 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
COL5A2P05997 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
COL5A2P05997 AL136116.3-201ENST00000402907 1138 ntBASIC32.24■■■□□ 2.75
COL5A2P05997 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
COL5A2P05997 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
COL5A2P05997 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
COL5A2P05997 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC32.23■■■□□ 2.75
COL5A2P05997 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC32.23■■■□□ 2.75
COL5A2P05997 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC32.23■■■□□ 2.75
COL5A2P05997 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC32.22■■■□□ 2.75
COL5A2P05997 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
COL5A2P05997 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC32.22■■■□□ 2.75
COL5A2P05997 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC32.22■■■□□ 2.75
COL5A2P05997 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
COL5A2P05997 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC32.21■■■□□ 2.75
COL5A2P05997 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
COL5A2P05997 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
COL5A2P05997 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC32.2■■■□□ 2.75
COL5A2P05997 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC32.2■■■□□ 2.75
COL5A2P05997 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC32.2■■■□□ 2.75
COL5A2P05997 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC32.2■■■□□ 2.74
COL5A2P05997 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
COL5A2P05997 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC32.19■■■□□ 2.74
COL5A2P05997 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC32.19■■■□□ 2.74
COL5A2P05997 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC32.19■■■□□ 2.74
COL5A2P05997 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
COL5A2P05997 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC32.19■■■□□ 2.74
COL5A2P05997 ABCB10P1-201ENST00000614297 2181 ntBASIC32.19■■■□□ 2.74
COL5A2P05997 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
COL5A2P05997 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
COL5A2P05997 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC32.18■■■□□ 2.74
COL5A2P05997 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC32.18■■■□□ 2.74
COL5A2P05997 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
COL5A2P05997 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC32.18■■■□□ 2.74
COL5A2P05997 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
COL5A2P05997 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC32.17■■■□□ 2.74
COL5A2P05997 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC32.17■■■□□ 2.74
COL5A2P05997 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
COL5A2P05997 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
COL5A2P05997 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC32.17■■■□□ 2.74
COL5A2P05997 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
COL5A2P05997 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC32.16■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms