Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDGFAP04085 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDGFAP04085 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.41■■□□□ 1.18
PDGFAP04085 RPS2P7-201ENST00000447334 885 ntBASIC22.41■■□□□ 1.18
PDGFAP04085 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PDGFAP04085 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PDGFAP04085 LONRF2P2-201ENST00000439212 571 ntBASIC22.4■■□□□ 1.18
PDGFAP04085 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.4■■□□□ 1.18
PDGFAP04085 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.4■■□□□ 1.18
PDGFAP04085 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.4■■□□□ 1.18
PDGFAP04085 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PDGFAP04085 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC22.4■■□□□ 1.18
PDGFAP04085 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.4■■□□□ 1.18
PDGFAP04085 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PDGFAP04085 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PDGFAP04085 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDGFAP04085 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PDGFAP04085 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.39■■□□□ 1.17
PDGFAP04085 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PDGFAP04085 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PDGFAP04085 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PDGFAP04085 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.38■■□□□ 1.17
PDGFAP04085 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.38■■□□□ 1.17
PDGFAP04085 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDGFAP04085 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDGFAP04085 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PDGFAP04085 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PDGFAP04085 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
PDGFAP04085 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDGFAP04085 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDGFAP04085 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDGFAP04085 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PDGFAP04085 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDGFAP04085 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PDGFAP04085 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PDGFAP04085 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PDGFAP04085 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PDGFAP04085 Z92544.1-202ENST00000571933 1220 ntBASIC22.36■■□□□ 1.17
PDGFAP04085 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
PDGFAP04085 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC22.35■■□□□ 1.17
PDGFAP04085 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PDGFAP04085 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PDGFAP04085 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PDGFAP04085 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC22.35■■□□□ 1.17
PDGFAP04085 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.35■■□□□ 1.17
PDGFAP04085 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PDGFAP04085 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDGFAP04085 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PDGFAP04085 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.35■■□□□ 1.17
PDGFAP04085 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PDGFAP04085 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
PDGFAP04085 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PDGFAP04085 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PDGFAP04085 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDGFAP04085 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
PDGFAP04085 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDGFAP04085 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDGFAP04085 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.33■■□□□ 1.17
PDGFAP04085 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
PDGFAP04085 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.33■■□□□ 1.17
PDGFAP04085 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDGFAP04085 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PDGFAP04085 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
PDGFAP04085 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.33■■□□□ 1.17
PDGFAP04085 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
PDGFAP04085 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.33■■□□□ 1.16
PDGFAP04085 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.16
PDGFAP04085 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
PDGFAP04085 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
PDGFAP04085 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
PDGFAP04085 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
PDGFAP04085 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.32■■□□□ 1.16
PDGFAP04085 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PDGFAP04085 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDGFAP04085 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
PDGFAP04085 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDGFAP04085 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.31■■□□□ 1.16
PDGFAP04085 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDGFAP04085 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PDGFAP04085 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.3■■□□□ 1.16
PDGFAP04085 AC008406.3-201ENST00000620001 1374 ntBASIC22.3■■□□□ 1.16
PDGFAP04085 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
PDGFAP04085 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PDGFAP04085 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
PDGFAP04085 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDGFAP04085 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.3■■□□□ 1.16
PDGFAP04085 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDGFAP04085 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PDGFAP04085 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDGFAP04085 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDGFAP04085 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDGFAP04085 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
PDGFAP04085 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.28■■□□□ 1.16
PDGFAP04085 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.28■■□□□ 1.16
PDGFAP04085 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.28■■□□□ 1.16
PDGFAP04085 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDGFAP04085 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PDGFAP04085 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.27■■□□□ 1.16
PDGFAP04085 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDGFAP04085 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms