Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 AL592293.1-201ENST00000502889 1188 ntBASIC18.83■□□□□ 0.6
TRGV3P03979 NTF6A-201ENST00000591175 560 ntBASIC18.83■□□□□ 0.6
TRGV3P03979 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRGV3P03979 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRGV3P03979 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC18.83■□□□□ 0.6
TRGV3P03979 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TRGV3P03979 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRGV3P03979 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRGV3P03979 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRGV3P03979 AC091060.1-201ENST00000623524 1766 ntBASIC18.82■□□□□ 0.6
TRGV3P03979 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.82■□□□□ 0.6
TRGV3P03979 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV3P03979 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV3P03979 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TRGV3P03979 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV3P03979 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV3P03979 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.81■□□□□ 0.6
TRGV3P03979 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV3P03979 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
TRGV3P03979 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRGV3P03979 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV3P03979 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.81■□□□□ 0.6
TRGV3P03979 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
TRGV3P03979 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.81■□□□□ 0.6
TRGV3P03979 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRGV3P03979 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV3P03979 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV3P03979 ERN1-208ENST00000606895 2068 ntBASIC18.8■□□□□ 0.6
TRGV3P03979 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV3P03979 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV3P03979 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV3P03979 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV3P03979 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.8■□□□□ 0.6
TRGV3P03979 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV3P03979 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.8■□□□□ 0.6
TRGV3P03979 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRGV3P03979 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRGV3P03979 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV3P03979 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV3P03979 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV3P03979 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.79■□□□□ 0.6
TRGV3P03979 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV3P03979 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
TRGV3P03979 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV3P03979 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV3P03979 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.79■□□□□ 0.6
TRGV3P03979 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRGV3P03979 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV3P03979 AC145676.1-201ENST00000514988 2004 ntBASIC18.78■□□□□ 0.6
TRGV3P03979 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV3P03979 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV3P03979 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV3P03979 KRT18P60-201ENST00000312876 1297 ntBASIC18.78■□□□□ 0.6
TRGV3P03979 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV3P03979 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV3P03979 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRGV3P03979 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.77■□□□□ 0.6
TRGV3P03979 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV3P03979 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV3P03979 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.77■□□□□ 0.6
TRGV3P03979 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.77■□□□□ 0.6
TRGV3P03979 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV3P03979 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV3P03979 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.77■□□□□ 0.6
TRGV3P03979 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRGV3P03979 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRGV3P03979 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TRGV3P03979 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV3P03979 AC010501.1-201ENST00000606270 1962 ntBASIC18.76■□□□□ 0.59
TRGV3P03979 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TRGV3P03979 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV3P03979 AC018755.3-202ENST00000596210 929 ntBASIC18.76■□□□□ 0.59
TRGV3P03979 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRGV3P03979 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRGV3P03979 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TRGV3P03979 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TRGV3P03979 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
TRGV3P03979 DUSP8P4-201ENST00000399538 1761 ntBASIC18.75■□□□□ 0.59
TRGV3P03979 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRGV3P03979 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV3P03979 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV3P03979 AC135731.1-201ENST00000569415 2548 ntBASIC18.74■□□□□ 0.59
TRGV3P03979 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV3P03979 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV3P03979 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV3P03979 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRGV3P03979 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.74■□□□□ 0.59
TRGV3P03979 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRGV3P03979 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.74■□□□□ 0.59
TRGV3P03979 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV3P03979 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRGV3P03979 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.73■□□□□ 0.59
TRGV3P03979 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV3P03979 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.73■□□□□ 0.59
TRGV3P03979 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.73■□□□□ 0.59
TRGV3P03979 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRGV3P03979 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TRGV3P03979 AC129492.7-201ENST00000622992 756 ntBASIC18.73■□□□□ 0.59
TRGV3P03979 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRGV3P03979 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 213 ms