Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOC3P02656 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
APOC3P02656 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
APOC3P02656 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOC3P02656 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOC3P02656 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOC3P02656 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.42■□□□□ 0.7
APOC3P02656 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.42■□□□□ 0.7
APOC3P02656 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
APOC3P02656 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.42■□□□□ 0.7
APOC3P02656 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
APOC3P02656 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
APOC3P02656 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
APOC3P02656 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOC3P02656 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
APOC3P02656 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOC3P02656 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.41■□□□□ 0.7
APOC3P02656 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
APOC3P02656 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
APOC3P02656 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
APOC3P02656 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOC3P02656 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APOC3P02656 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOC3P02656 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APOC3P02656 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
APOC3P02656 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOC3P02656 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOC3P02656 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOC3P02656 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOC3P02656 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
APOC3P02656 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.4■□□□□ 0.7
APOC3P02656 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOC3P02656 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
APOC3P02656 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
APOC3P02656 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.4■□□□□ 0.7
APOC3P02656 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOC3P02656 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.39■□□□□ 0.69
APOC3P02656 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOC3P02656 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOC3P02656 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOC3P02656 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOC3P02656 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOC3P02656 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
APOC3P02656 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC19.38■□□□□ 0.69
APOC3P02656 LINC01124-201ENST00000409786 2117 ntBASIC19.38■□□□□ 0.69
APOC3P02656 WHAMMP3-201ENST00000611636 1609 ntBASIC19.38■□□□□ 0.69
APOC3P02656 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.38■□□□□ 0.69
APOC3P02656 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.38■□□□□ 0.69
APOC3P02656 C9orf163-202ENST00000624034 2573 ntBASIC19.38■□□□□ 0.69
APOC3P02656 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
APOC3P02656 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
APOC3P02656 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
APOC3P02656 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
APOC3P02656 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
APOC3P02656 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.37■□□□□ 0.69
APOC3P02656 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOC3P02656 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
APOC3P02656 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
APOC3P02656 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOC3P02656 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.36■□□□□ 0.69
APOC3P02656 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC3P02656 AP002414.2-202ENST00000590929 1450 ntBASIC19.35■□□□□ 0.69
APOC3P02656 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC3P02656 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC3P02656 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC3P02656 AC100797.4-201ENST00000631653 1827 ntBASIC19.35■□□□□ 0.69
APOC3P02656 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC3P02656 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
APOC3P02656 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC3P02656 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
APOC3P02656 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
APOC3P02656 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.34■□□□□ 0.69
APOC3P02656 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APOC3P02656 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APOC3P02656 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.34■□□□□ 0.69
APOC3P02656 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APOC3P02656 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.34■□□□□ 0.69
APOC3P02656 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
APOC3P02656 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
APOC3P02656 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOC3P02656 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
APOC3P02656 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
APOC3P02656 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
APOC3P02656 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.34■□□□□ 0.69
APOC3P02656 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.33■□□□□ 0.69
APOC3P02656 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.33■□□□□ 0.69
APOC3P02656 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
APOC3P02656 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
APOC3P02656 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
APOC3P02656 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
APOC3P02656 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.33■□□□□ 0.68
APOC3P02656 C1orf229-201ENST00000623686 2258 ntBASIC19.33■□□□□ 0.68
APOC3P02656 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
APOC3P02656 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
APOC3P02656 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOC3P02656 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
APOC3P02656 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.33■□□□□ 0.68
APOC3P02656 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
APOC3P02656 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
APOC3P02656 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms