Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN1O95832 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN1O95832 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN1O95832 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN1O95832 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CLDN1O95832 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CLDN1O95832 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
CLDN1O95832 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.47■■□□□ 1.03
CLDN1O95832 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN1O95832 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CLDN1O95832 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN1O95832 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN1O95832 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.46■■□□□ 1.03
CLDN1O95832 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.46■■□□□ 1.03
CLDN1O95832 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN1O95832 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CLDN1O95832 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.46■■□□□ 1.03
CLDN1O95832 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.45■■□□□ 1.02
CLDN1O95832 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN1O95832 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN1O95832 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
CLDN1O95832 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN1O95832 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CLDN1O95832 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN1O95832 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN1O95832 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN1O95832 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CLDN1O95832 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN1O95832 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CLDN1O95832 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
CLDN1O95832 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN1O95832 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CLDN1O95832 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.44■■□□□ 1.02
CLDN1O95832 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.43■■□□□ 1.02
CLDN1O95832 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN1O95832 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CLDN1O95832 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CLDN1O95832 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN1O95832 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN1O95832 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
CLDN1O95832 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.42■■□□□ 1.02
CLDN1O95832 AL139393.2-201ENST00000608721 2025 ntBASIC21.42■■□□□ 1.02
CLDN1O95832 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN1O95832 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.42■■□□□ 1.02
CLDN1O95832 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CLDN1O95832 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.42■■□□□ 1.02
CLDN1O95832 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.41■■□□□ 1.02
CLDN1O95832 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN1O95832 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN1O95832 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN1O95832 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN1O95832 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN1O95832 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.41■■□□□ 1.02
CLDN1O95832 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CLDN1O95832 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN1O95832 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN1O95832 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN1O95832 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.4■■□□□ 1.02
CLDN1O95832 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN1O95832 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CLDN1O95832 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CLDN1O95832 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CLDN1O95832 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.39■■□□□ 1.02
CLDN1O95832 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
CLDN1O95832 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CLDN1O95832 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.39■■□□□ 1.01
CLDN1O95832 AC096631.2-201ENST00000436136 790 ntBASIC21.39■■□□□ 1.01
CLDN1O95832 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.39■■□□□ 1.01
CLDN1O95832 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.39■■□□□ 1.01
CLDN1O95832 RARRES2P6-201ENST00000567333 442 ntBASIC21.39■■□□□ 1.01
CLDN1O95832 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.39■■□□□ 1.01
CLDN1O95832 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CLDN1O95832 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CLDN1O95832 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN1O95832 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN1O95832 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.38■■□□□ 1.01
CLDN1O95832 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.38■■□□□ 1.01
CLDN1O95832 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
CLDN1O95832 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN1O95832 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.38■■□□□ 1.01
CLDN1O95832 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.38■■□□□ 1.01
CLDN1O95832 AC137630.3-201ENST00000607245 391 ntBASIC21.38■■□□□ 1.01
CLDN1O95832 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.38■■□□□ 1.01
CLDN1O95832 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN1O95832 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CLDN1O95832 AC021242.3-201ENST00000607598 1377 ntBASIC21.37■■□□□ 1.01
CLDN1O95832 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLDN1O95832 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLDN1O95832 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.37■■□□□ 1.01
CLDN1O95832 AC022616.5-201ENST00000518796 181 ntBASIC21.37■■□□□ 1.01
CLDN1O95832 AC142086.6-201ENST00000621154 1765 ntBASIC21.37■■□□□ 1.01
CLDN1O95832 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLDN1O95832 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CLDN1O95832 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.37■■□□□ 1.01
CLDN1O95832 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CLDN1O95832 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CLDN1O95832 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CLDN1O95832 KRT18P24-201ENST00000344739 1156 ntBASIC21.36■■□□□ 1.01
CLDN1O95832 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.36■■□□□ 1.01
CLDN1O95832 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms