Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDRT1O95170 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CDRT1O95170 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
CDRT1O95170 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDRT1O95170 AL162393.1-201ENST00000437852 946 ntBASIC21.29■■□□□ 1
CDRT1O95170 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CDRT1O95170 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDRT1O95170 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDRT1O95170 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CDRT1O95170 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CDRT1O95170 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.28■■□□□ 1
CDRT1O95170 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDRT1O95170 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDRT1O95170 AC110285.7-201ENST00000624417 1536 ntBASIC21.28■■□□□ 1
CDRT1O95170 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDRT1O95170 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.28■■□□□ 1
CDRT1O95170 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDRT1O95170 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDRT1O95170 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDRT1O95170 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CDRT1O95170 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.27■■□□□ 1
CDRT1O95170 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDRT1O95170 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDRT1O95170 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.27■■□□□ 1
CDRT1O95170 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDRT1O95170 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDRT1O95170 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CDRT1O95170 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.27■■□□□ 1
CDRT1O95170 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDRT1O95170 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDRT1O95170 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDRT1O95170 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.27■□□□□ 0.99
CDRT1O95170 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
CDRT1O95170 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDRT1O95170 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CDRT1O95170 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.26■□□□□ 0.99
CDRT1O95170 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CDRT1O95170 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CDRT1O95170 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.25■□□□□ 0.99
CDRT1O95170 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDRT1O95170 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.25■□□□□ 0.99
CDRT1O95170 AC044849.2-201ENST00000606596 710 ntBASIC21.25■□□□□ 0.99
CDRT1O95170 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.25■□□□□ 0.99
CDRT1O95170 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CDRT1O95170 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDRT1O95170 AC096887.2-201ENST00000623443 1957 ntBASIC21.24■□□□□ 0.99
CDRT1O95170 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CDRT1O95170 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.24■□□□□ 0.99
CDRT1O95170 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CDRT1O95170 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CDRT1O95170 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CDRT1O95170 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.23■□□□□ 0.99
CDRT1O95170 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CDRT1O95170 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CDRT1O95170 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDRT1O95170 AC097639.1-201ENST00000565519 1891 ntBASIC21.22■□□□□ 0.99
CDRT1O95170 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.22■□□□□ 0.99
CDRT1O95170 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDRT1O95170 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.22■□□□□ 0.99
CDRT1O95170 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDRT1O95170 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CDRT1O95170 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CDRT1O95170 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDRT1O95170 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.22■□□□□ 0.99
CDRT1O95170 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDRT1O95170 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.21■□□□□ 0.99
CDRT1O95170 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDRT1O95170 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.21■□□□□ 0.99
CDRT1O95170 AC079834.2-201ENST00000609776 1949 ntBASIC21.21■□□□□ 0.99
CDRT1O95170 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDRT1O95170 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.21■□□□□ 0.99
CDRT1O95170 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
CDRT1O95170 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDRT1O95170 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.2■□□□□ 0.98
CDRT1O95170 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDRT1O95170 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CDRT1O95170 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT1O95170 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT1O95170 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT1O95170 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT1O95170 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT1O95170 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CDRT1O95170 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.19■□□□□ 0.98
CDRT1O95170 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT1O95170 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT1O95170 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
CDRT1O95170 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT1O95170 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.19■□□□□ 0.98
CDRT1O95170 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDRT1O95170 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDRT1O95170 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDRT1O95170 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CDRT1O95170 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDRT1O95170 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDRT1O95170 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CDRT1O95170 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CDRT1O95170 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDRT1O95170 AC021231.2-201ENST00000594613 730 ntBASIC21.17■□□□□ 0.98
CDRT1O95170 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDRT1O95170 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms