Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PRAMEF11O60813 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
PRAMEF11O60813 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
PRAMEF11O60813 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PRAMEF11O60813 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PRAMEF11O60813 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PRAMEF11O60813 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PRAMEF11O60813 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PRAMEF11O60813 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PRAMEF11O60813 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC24.53■■□□□ 1.52
PRAMEF11O60813 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PRAMEF11O60813 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
PRAMEF11O60813 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PRAMEF11O60813 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PRAMEF11O60813 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PRAMEF11O60813 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.52■■□□□ 1.52
PRAMEF11O60813 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PRAMEF11O60813 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.51■■□□□ 1.51
PRAMEF11O60813 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.51■■□□□ 1.51
PRAMEF11O60813 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.51■■□□□ 1.51
PRAMEF11O60813 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC24.51■■□□□ 1.51
PRAMEF11O60813 AC096887.2-201ENST00000623443 1957 ntBASIC24.51■■□□□ 1.51
PRAMEF11O60813 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.5■■□□□ 1.51
PRAMEF11O60813 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC24.5■■□□□ 1.51
PRAMEF11O60813 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PRAMEF11O60813 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PRAMEF11O60813 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PRAMEF11O60813 AC018755.3-202ENST00000596210 929 ntBASIC24.5■■□□□ 1.51
PRAMEF11O60813 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.5■■□□□ 1.51
PRAMEF11O60813 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PRAMEF11O60813 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PRAMEF11O60813 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC24.49■■□□□ 1.51
PRAMEF11O60813 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.49■■□□□ 1.51
PRAMEF11O60813 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PRAMEF11O60813 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.49■■□□□ 1.51
PRAMEF11O60813 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PRAMEF11O60813 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
PRAMEF11O60813 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PRAMEF11O60813 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PRAMEF11O60813 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PRAMEF11O60813 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.48■■□□□ 1.51
PRAMEF11O60813 MIR6765-201ENST00000614092 87 ntBASIC24.48■■□□□ 1.51
PRAMEF11O60813 AC012354.3-201ENST00000623734 483 ntBASIC24.48■■□□□ 1.51
PRAMEF11O60813 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PRAMEF11O60813 AC004987.1-201ENST00000428627 508 ntBASIC24.47■■□□□ 1.51
PRAMEF11O60813 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC24.47■■□□□ 1.51
PRAMEF11O60813 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.47■■□□□ 1.51
PRAMEF11O60813 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PRAMEF11O60813 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
PRAMEF11O60813 ATP5G2P3-201ENST00000429083 425 ntBASIC24.46■■□□□ 1.51
PRAMEF11O60813 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PRAMEF11O60813 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
PRAMEF11O60813 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.5
PRAMEF11O60813 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PRAMEF11O60813 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.45■■□□□ 1.5
PRAMEF11O60813 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PRAMEF11O60813 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PRAMEF11O60813 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PRAMEF11O60813 KRT18P10-201ENST00000388836 1287 ntBASIC24.44■■□□□ 1.5
PRAMEF11O60813 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.44■■□□□ 1.5
PRAMEF11O60813 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.44■■□□□ 1.5
PRAMEF11O60813 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
PRAMEF11O60813 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PRAMEF11O60813 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PRAMEF11O60813 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
PRAMEF11O60813 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PRAMEF11O60813 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PRAMEF11O60813 DUX4L18-201ENST00000553347 1267 ntBASIC24.43■■□□□ 1.5
PRAMEF11O60813 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.43■■□□□ 1.5
PRAMEF11O60813 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.43■■□□□ 1.5
PRAMEF11O60813 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.43■■□□□ 1.5
PRAMEF11O60813 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.42■■□□□ 1.5
PRAMEF11O60813 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PRAMEF11O60813 TSPY13P-201ENST00000338964 914 ntBASIC24.42■■□□□ 1.5
PRAMEF11O60813 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PRAMEF11O60813 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PRAMEF11O60813 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
PRAMEF11O60813 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC24.42■■□□□ 1.5
PRAMEF11O60813 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
PRAMEF11O60813 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PRAMEF11O60813 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRAMEF11O60813 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRAMEF11O60813 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.41■■□□□ 1.5
PRAMEF11O60813 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
PRAMEF11O60813 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.41■■□□□ 1.5
PRAMEF11O60813 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC24.41■■□□□ 1.5
PRAMEF11O60813 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRAMEF11O60813 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PRAMEF11O60813 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
PRAMEF11O60813 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
PRAMEF11O60813 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PRAMEF11O60813 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PRAMEF11O60813 RPS2P7-201ENST00000447334 885 ntBASIC24.39■■□□□ 1.49
PRAMEF11O60813 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.39■■□□□ 1.49
PRAMEF11O60813 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC24.39■■□□□ 1.49
PRAMEF11O60813 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PRAMEF11O60813 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PRAMEF11O60813 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRAMEF11O60813 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PRAMEF11O60813 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms