Protein–RNA interactions for Protein: O15537

RS1, Retinoschisin, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RS1O15537 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RS1O15537 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RS1O15537 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.2■□□□□ 0.34
RS1O15537 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RS1O15537 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RS1O15537 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RS1O15537 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RS1O15537 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RS1O15537 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RS1O15537 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RS1O15537 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RS1O15537 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RS1O15537 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RS1O15537 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RS1O15537 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.19■□□□□ 0.34
RS1O15537 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RS1O15537 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RS1O15537 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RS1O15537 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RS1O15537 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RS1O15537 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RS1O15537 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RS1O15537 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RS1O15537 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RS1O15537 AL157400.5-201ENST00000507624 621 ntBASIC17.18■□□□□ 0.34
RS1O15537 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RS1O15537 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RS1O15537 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
RS1O15537 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RS1O15537 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.17■□□□□ 0.34
RS1O15537 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RS1O15537 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.17■□□□□ 0.34
RS1O15537 AC142381.3-201ENST00000568208 1670 ntBASIC17.17■□□□□ 0.34
RS1O15537 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RS1O15537 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RS1O15537 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RS1O15537 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.17■□□□□ 0.34
RS1O15537 AC060814.1-201ENST00000554326 538 ntBASIC17.17■□□□□ 0.34
RS1O15537 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RS1O15537 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RS1O15537 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC17.16■□□□□ 0.34
RS1O15537 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.16■□□□□ 0.34
RS1O15537 AC025884.2-201ENST00000553429 711 ntBASIC17.16■□□□□ 0.34
RS1O15537 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RS1O15537 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.16■□□□□ 0.34
RS1O15537 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RS1O15537 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.16■□□□□ 0.34
RS1O15537 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RS1O15537 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RS1O15537 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RS1O15537 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RS1O15537 MIR639-201ENST00000384974 98 ntBASIC17.15■□□□□ 0.34
RS1O15537 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.15■□□□□ 0.34
RS1O15537 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RS1O15537 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.15■□□□□ 0.34
RS1O15537 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RS1O15537 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RS1O15537 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RS1O15537 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC17.15■□□□□ 0.34
RS1O15537 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RS1O15537 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RS1O15537 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RS1O15537 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RS1O15537 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RS1O15537 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.14■□□□□ 0.33
RS1O15537 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.14■□□□□ 0.33
RS1O15537 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RS1O15537 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RS1O15537 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
RS1O15537 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RS1O15537 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RS1O15537 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RS1O15537 MIR3960-201ENST00000583311 91 ntBASIC17.13■□□□□ 0.33
RS1O15537 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RS1O15537 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RS1O15537 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RS1O15537 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RS1O15537 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RS1O15537 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RS1O15537 SMPD5-203ENST00000639008 1464 ntBASIC17.12■□□□□ 0.33
RS1O15537 AC022211.4-201ENST00000625094 2161 ntBASIC17.11■□□□□ 0.33
RS1O15537 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RS1O15537 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RS1O15537 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RS1O15537 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RS1O15537 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RS1O15537 AC097639.1-201ENST00000565519 1891 ntBASIC17.11■□□□□ 0.33
RS1O15537 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RS1O15537 MED17-227ENST00000640521 2047 ntTSL 5 BASIC17.11■□□□□ 0.33
RS1O15537 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RS1O15537 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RS1O15537 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RS1O15537 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RS1O15537 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RS1O15537 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.1■□□□□ 0.33
RS1O15537 AC092296.2-201ENST00000589470 999 ntBASIC17.1■□□□□ 0.33
RS1O15537 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.1■□□□□ 0.33
RS1O15537 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RS1O15537 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RS1O15537 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms