Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CDHR4A6H8M9 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC22.11■■□□□ 1.13
CDHR4A6H8M9 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDHR4A6H8M9 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.11■■□□□ 1.13
CDHR4A6H8M9 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDHR4A6H8M9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CDHR4A6H8M9 REST-210ENST00000638187 1334 ntTSL 5 BASIC22.1■■□□□ 1.13
CDHR4A6H8M9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDHR4A6H8M9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.1■■□□□ 1.13
CDHR4A6H8M9 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.1■■□□□ 1.13
CDHR4A6H8M9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDHR4A6H8M9 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDHR4A6H8M9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDHR4A6H8M9 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDHR4A6H8M9 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDHR4A6H8M9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDHR4A6H8M9 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.08■■□□□ 1.13
CDHR4A6H8M9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.08■■□□□ 1.13
CDHR4A6H8M9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
CDHR4A6H8M9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDHR4A6H8M9 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDHR4A6H8M9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.08■■□□□ 1.13
CDHR4A6H8M9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
CDHR4A6H8M9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CDHR4A6H8M9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDHR4A6H8M9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
CDHR4A6H8M9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.07■■□□□ 1.12
CDHR4A6H8M9 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CDHR4A6H8M9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CDHR4A6H8M9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDHR4A6H8M9 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
CDHR4A6H8M9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDHR4A6H8M9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDHR4A6H8M9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.06■■□□□ 1.12
CDHR4A6H8M9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
CDHR4A6H8M9 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
CDHR4A6H8M9 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CDHR4A6H8M9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.06■■□□□ 1.12
CDHR4A6H8M9 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC22.06■■□□□ 1.12
CDHR4A6H8M9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDHR4A6H8M9 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CDHR4A6H8M9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CDHR4A6H8M9 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDHR4A6H8M9 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDHR4A6H8M9 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDHR4A6H8M9 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CDHR4A6H8M9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDHR4A6H8M9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CDHR4A6H8M9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.04■■□□□ 1.12
CDHR4A6H8M9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
CDHR4A6H8M9 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDHR4A6H8M9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDHR4A6H8M9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.03■■□□□ 1.12
CDHR4A6H8M9 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDHR4A6H8M9 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
CDHR4A6H8M9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDHR4A6H8M9 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
CDHR4A6H8M9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.03■■□□□ 1.12
CDHR4A6H8M9 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDHR4A6H8M9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CDHR4A6H8M9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDHR4A6H8M9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDHR4A6H8M9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDHR4A6H8M9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CDHR4A6H8M9 GPX1-201ENST00000419349 1106 ntBASIC22.02■■□□□ 1.12
CDHR4A6H8M9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.02■■□□□ 1.12
CDHR4A6H8M9 RP9P-202ENST00000450133 1212 ntBASIC22.02■■□□□ 1.12
CDHR4A6H8M9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
CDHR4A6H8M9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CDHR4A6H8M9 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CDHR4A6H8M9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.11
CDHR4A6H8M9 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDHR4A6H8M9 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.01■■□□□ 1.11
CDHR4A6H8M9 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDHR4A6H8M9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDHR4A6H8M9 AC097639.1-201ENST00000565519 1891 ntBASIC22■■□□□ 1.11
CDHR4A6H8M9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CDHR4A6H8M9 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22■■□□□ 1.11
CDHR4A6H8M9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CDHR4A6H8M9 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22■■□□□ 1.11
CDHR4A6H8M9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CDHR4A6H8M9 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22■■□□□ 1.11
CDHR4A6H8M9 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22■■□□□ 1.11
CDHR4A6H8M9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22■■□□□ 1.11
CDHR4A6H8M9 AC007029.1-201ENST00000604183 313 ntBASIC22■■□□□ 1.11
CDHR4A6H8M9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC22■■□□□ 1.11
CDHR4A6H8M9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDHR4A6H8M9 AC093536.1-201ENST00000569153 554 ntBASIC21.99■■□□□ 1.11
CDHR4A6H8M9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.99■■□□□ 1.11
CDHR4A6H8M9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.99■■□□□ 1.11
CDHR4A6H8M9 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDHR4A6H8M9 AC142381.3-201ENST00000568208 1670 ntBASIC21.98■■□□□ 1.11
CDHR4A6H8M9 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDHR4A6H8M9 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDHR4A6H8M9 AC022211.4-201ENST00000625094 2161 ntBASIC21.98■■□□□ 1.11
CDHR4A6H8M9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
CDHR4A6H8M9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.98■■□□□ 1.11
CDHR4A6H8M9 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDHR4A6H8M9 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDHR4A6H8M9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms