Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV25A0A0B4J276 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
TRAV25A0A0B4J276 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV25A0A0B4J276 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.07■□□□□ 0.48
TRAV25A0A0B4J276 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV25A0A0B4J276 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV25A0A0B4J276 AC074183.2-201ENST00000623112 922 ntBASIC18.07■□□□□ 0.48
TRAV25A0A0B4J276 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV25A0A0B4J276 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV25A0A0B4J276 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV25A0A0B4J276 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRAV25A0A0B4J276 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV25A0A0B4J276 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV25A0A0B4J276 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV25A0A0B4J276 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV25A0A0B4J276 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV25A0A0B4J276 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV25A0A0B4J276 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV25A0A0B4J276 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV25A0A0B4J276 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV25A0A0B4J276 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.05■□□□□ 0.48
TRAV25A0A0B4J276 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV25A0A0B4J276 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TRAV25A0A0B4J276 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV25A0A0B4J276 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.05■□□□□ 0.48
TRAV25A0A0B4J276 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV25A0A0B4J276 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TRAV25A0A0B4J276 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRAV25A0A0B4J276 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV25A0A0B4J276 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV25A0A0B4J276 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV25A0A0B4J276 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV25A0A0B4J276 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.04■□□□□ 0.48
TRAV25A0A0B4J276 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV25A0A0B4J276 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV25A0A0B4J276 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRAV25A0A0B4J276 AC092803.2-201ENST00000564287 1899 ntBASIC18.03■□□□□ 0.48
TRAV25A0A0B4J276 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
TRAV25A0A0B4J276 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV25A0A0B4J276 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.03■□□□□ 0.48
TRAV25A0A0B4J276 RPS2P7-201ENST00000447334 885 ntBASIC18.03■□□□□ 0.48
TRAV25A0A0B4J276 AC139795.1-202ENST00000500444 432 ntBASIC18.03■□□□□ 0.48
TRAV25A0A0B4J276 DUX4L18-201ENST00000553347 1267 ntBASIC18.03■□□□□ 0.48
TRAV25A0A0B4J276 AL033527.3-201ENST00000566366 1196 ntBASIC18.03■□□□□ 0.48
TRAV25A0A0B4J276 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV25A0A0B4J276 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV25A0A0B4J276 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV25A0A0B4J276 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV25A0A0B4J276 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRAV25A0A0B4J276 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV25A0A0B4J276 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV25A0A0B4J276 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.02■□□□□ 0.48
TRAV25A0A0B4J276 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRAV25A0A0B4J276 AC087393.1-201ENST00000582896 145 ntBASIC18.02■□□□□ 0.48
TRAV25A0A0B4J276 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TRAV25A0A0B4J276 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.02■□□□□ 0.47
TRAV25A0A0B4J276 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV25A0A0B4J276 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TRAV25A0A0B4J276 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRAV25A0A0B4J276 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAV25A0A0B4J276 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAV25A0A0B4J276 SNAI3-AS1-204ENST00000567997 2048 ntBASIC18.01■□□□□ 0.47
TRAV25A0A0B4J276 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRAV25A0A0B4J276 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV25A0A0B4J276 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
TRAV25A0A0B4J276 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV25A0A0B4J276 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV25A0A0B4J276 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
TRAV25A0A0B4J276 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.01■□□□□ 0.47
TRAV25A0A0B4J276 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAV25A0A0B4J276 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.01■□□□□ 0.47
TRAV25A0A0B4J276 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRAV25A0A0B4J276 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRAV25A0A0B4J276 AC010501.1-201ENST00000606270 1962 ntBASIC18■□□□□ 0.47
TRAV25A0A0B4J276 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV25A0A0B4J276 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV25A0A0B4J276 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV25A0A0B4J276 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV25A0A0B4J276 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV25A0A0B4J276 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18■□□□□ 0.47
TRAV25A0A0B4J276 BHLHE23-202ENST00000612929 1109 ntBASIC18■□□□□ 0.47
TRAV25A0A0B4J276 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18■□□□□ 0.47
TRAV25A0A0B4J276 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18■□□□□ 0.47
TRAV25A0A0B4J276 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRAV25A0A0B4J276 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV25A0A0B4J276 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRAV25A0A0B4J276 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TRAV25A0A0B4J276 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV25A0A0B4J276 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.99■□□□□ 0.47
TRAV25A0A0B4J276 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV25A0A0B4J276 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV25A0A0B4J276 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRAV25A0A0B4J276 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC17.99■□□□□ 0.47
TRAV25A0A0B4J276 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV25A0A0B4J276 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAV25A0A0B4J276 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAV25A0A0B4J276 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.98■□□□□ 0.47
TRAV25A0A0B4J276 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.98■□□□□ 0.47
TRAV25A0A0B4J276 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TRAV25A0A0B4J276 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms