Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAV8-1A0A0A6YYK1 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-1A0A0A6YYK1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRAV8-1A0A0A6YYK1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAV8-1A0A0A6YYK1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-1A0A0A6YYK1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
TRAV8-1A0A0A6YYK1 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-1A0A0A6YYK1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-1A0A0A6YYK1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAV8-1A0A0A6YYK1 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV8-1A0A0A6YYK1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAV8-1A0A0A6YYK1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV8-1A0A0A6YYK1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV8-1A0A0A6YYK1 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV8-1A0A0A6YYK1 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV8-1A0A0A6YYK1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAV8-1A0A0A6YYK1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-1A0A0A6YYK1 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-1A0A0A6YYK1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-1A0A0A6YYK1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-1A0A0A6YYK1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-1A0A0A6YYK1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-1A0A0A6YYK1 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-1A0A0A6YYK1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.13■□□□□ 0.49
TRAV8-1A0A0A6YYK1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRAV8-1A0A0A6YYK1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-1A0A0A6YYK1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-1A0A0A6YYK1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRAV8-1A0A0A6YYK1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-1A0A0A6YYK1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV8-1A0A0A6YYK1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-1A0A0A6YYK1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-1A0A0A6YYK1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.12■□□□□ 0.49
TRAV8-1A0A0A6YYK1 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-1A0A0A6YYK1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-1A0A0A6YYK1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-1A0A0A6YYK1 LINC01124-201ENST00000409786 2117 ntBASIC18.12■□□□□ 0.49
TRAV8-1A0A0A6YYK1 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV8-1A0A0A6YYK1 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV8-1A0A0A6YYK1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-1A0A0A6YYK1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.12■□□□□ 0.49
TRAV8-1A0A0A6YYK1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRAV8-1A0A0A6YYK1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRAV8-1A0A0A6YYK1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRAV8-1A0A0A6YYK1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRAV8-1A0A0A6YYK1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRAV8-1A0A0A6YYK1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-1A0A0A6YYK1 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRAV8-1A0A0A6YYK1 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-1A0A0A6YYK1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-1A0A0A6YYK1 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAV8-1A0A0A6YYK1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-1A0A0A6YYK1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-1A0A0A6YYK1 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-1A0A0A6YYK1 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRAV8-1A0A0A6YYK1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-1A0A0A6YYK1 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-1A0A0A6YYK1 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.1■□□□□ 0.49
TRAV8-1A0A0A6YYK1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-1A0A0A6YYK1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRAV8-1A0A0A6YYK1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRAV8-1A0A0A6YYK1 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV8-1A0A0A6YYK1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV8-1A0A0A6YYK1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.09■□□□□ 0.49
TRAV8-1A0A0A6YYK1 AC133561.1-201ENST00000568600 2415 ntBASIC18.09■□□□□ 0.49
TRAV8-1A0A0A6YYK1 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRAV8-1A0A0A6YYK1 MIR219A2-201ENST00000608502 1504 ntBASIC18.08■□□□□ 0.49
TRAV8-1A0A0A6YYK1 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV8-1A0A0A6YYK1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRAV8-1A0A0A6YYK1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV8-1A0A0A6YYK1 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV8-1A0A0A6YYK1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV8-1A0A0A6YYK1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
TRAV8-1A0A0A6YYK1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
TRAV8-1A0A0A6YYK1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRAV8-1A0A0A6YYK1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-1A0A0A6YYK1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-1A0A0A6YYK1 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.07■□□□□ 0.48
TRAV8-1A0A0A6YYK1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-1A0A0A6YYK1 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-1A0A0A6YYK1 AL359504.2-201ENST00000605506 1601 ntBASIC18.07■□□□□ 0.48
TRAV8-1A0A0A6YYK1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-1A0A0A6YYK1 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-1A0A0A6YYK1 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRAV8-1A0A0A6YYK1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TRAV8-1A0A0A6YYK1 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TRAV8-1A0A0A6YYK1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.07■□□□□ 0.48
TRAV8-1A0A0A6YYK1 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV8-1A0A0A6YYK1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV8-1A0A0A6YYK1 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV8-1A0A0A6YYK1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV8-1A0A0A6YYK1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV8-1A0A0A6YYK1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV8-1A0A0A6YYK1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV8-1A0A0A6YYK1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC18.06■□□□□ 0.48
TRAV8-1A0A0A6YYK1 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV8-1A0A0A6YYK1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.06■□□□□ 0.48
TRAV8-1A0A0A6YYK1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRAV8-1A0A0A6YYK1 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
TRAV8-1A0A0A6YYK1 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms