Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AC016396.2-201ENST00000562575 1417 ntBASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
DDX49Q9Y6V7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 MIR574-201ENST00000385209 96 ntBASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 SART3-203ENST00000546611 1184 ntBASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
DDX49Q9Y6V7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 AC116353.5-201ENST00000638148 1699 ntBASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
DDX49Q9Y6V7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms