Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 ACTG1P4-201ENST00000425123 1122 ntBASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 AC073592.4-201ENST00000623827 446 ntBASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 AP005117.1-201ENST00000584346 1413 ntBASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 AC132872.4-202ENST00000622924 2756 ntBASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
RNF11Q9Y3C5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 AC007950.2-201ENST00000615045 2347 ntBASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
RNF11Q9Y3C5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RNF11Q9Y3C5 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF11Q9Y3C5 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.58■□□□□ 0.25
RNF11Q9Y3C5 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 LINC00982-205ENST00000420957 435 ntBASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 AL732292.2-201ENST00000609649 430 ntBASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF11Q9Y3C5 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 AC092171.3-201ENST00000610122 2651 ntBASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 AC092850.2-201ENST00000623821 2697 ntBASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 AC006449.5-201ENST00000610658 2098 ntBASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF11Q9Y3C5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms