Protein–RNA interactions for Protein: Q9NYL5

CYP39A1, 24-hydroxycholesterol 7-alpha-hydroxylase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP39A1Q9NYL5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CYP39A1Q9NYL5 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.15■□□□□ 0.66
CYP39A1Q9NYL5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.15■□□□□ 0.66
CYP39A1Q9NYL5 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CYP39A1Q9NYL5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
CYP39A1Q9NYL5 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
CYP39A1Q9NYL5 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CYP39A1Q9NYL5 AC016027.1-202ENST00000607927 1699 ntBASIC19.14■□□□□ 0.66
CYP39A1Q9NYL5 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.14■□□□□ 0.66
CYP39A1Q9NYL5 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 AC008267.7-201ENST00000624570 1194 ntBASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CYP39A1Q9NYL5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 SPDYE14P-201ENST00000442619 822 ntBASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 AC026150.2-201ENST00000564693 1156 ntBASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 RHBDF1P1-201ENST00000427504 1941 ntBASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 AC108860.2-201ENST00000562760 2183 ntBASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CYP39A1Q9NYL5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 TUBB3P1-201ENST00000405796 1332 ntBASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 MIR346-201ENST00000362234 95 ntBASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.12■□□□□ 0.65
CYP39A1Q9NYL5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms