Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 NUS1P1-201ENST00000446295 882 ntBASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 KRT18P56-201ENST00000507275 550 ntBASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 AP005901.3-202ENST00000581653 237 ntBASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.15□□□□□ -0.14
LIN7CQ9NUP9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.15□□□□□ -0.15
LIN7CQ9NUP9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 POM121L3P-201ENST00000419331 1163 ntBASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 AC091607.1-201ENST00000490318 1060 ntBASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 PRELID1P1-202ENST00000567272 903 ntBASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 RNF216P1-203ENST00000404404 2427 ntBASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LIN7CQ9NUP9 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.13□□□□□ -0.15
LIN7CQ9NUP9 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms