Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
SH2D4AQ9H788 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH2D4AQ9H788 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH2D4AQ9H788 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH2D4AQ9H788 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH2D4AQ9H788 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SH2D4AQ9H788 AC005237.2-201ENST00000434368 219 ntBASIC19.72■□□□□ 0.75
SH2D4AQ9H788 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SH2D4AQ9H788 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH2D4AQ9H788 KRT8P48-201ENST00000515599 1220 ntBASIC19.72■□□□□ 0.75
SH2D4AQ9H788 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.72■□□□□ 0.75
SH2D4AQ9H788 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SH2D4AQ9H788 AC087641.1-201ENST00000557561 1021 ntBASIC19.72■□□□□ 0.75
SH2D4AQ9H788 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.72■□□□□ 0.75
SH2D4AQ9H788 MIR3909-201ENST00000579518 119 ntBASIC19.72■□□□□ 0.75
SH2D4AQ9H788 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.72■□□□□ 0.75
SH2D4AQ9H788 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SH2D4AQ9H788 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.72■□□□□ 0.75
SH2D4AQ9H788 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SH2D4AQ9H788 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 AL592309.1-201ENST00000443127 649 ntBASIC19.71■□□□□ 0.75
SH2D4AQ9H788 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 AC079140.1-201ENST00000508039 487 ntBASIC19.71■□□□□ 0.75
SH2D4AQ9H788 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.71■□□□□ 0.75
SH2D4AQ9H788 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 LINC00628-201ENST00000628516 1289 ntBASIC19.71■□□□□ 0.75
SH2D4AQ9H788 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SH2D4AQ9H788 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH2D4AQ9H788 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SH2D4AQ9H788 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.7■□□□□ 0.74
SH2D4AQ9H788 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SH2D4AQ9H788 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH2D4AQ9H788 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
SH2D4AQ9H788 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SH2D4AQ9H788 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SH2D4AQ9H788 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SH2D4AQ9H788 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.7■□□□□ 0.74
SH2D4AQ9H788 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.7■□□□□ 0.74
SH2D4AQ9H788 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.7■□□□□ 0.74
SH2D4AQ9H788 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC19.7■□□□□ 0.74
SH2D4AQ9H788 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.7■□□□□ 0.74
SH2D4AQ9H788 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.7■□□□□ 0.74
SH2D4AQ9H788 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SH2D4AQ9H788 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 KRT8P49-201ENST00000604166 1432 ntBASIC19.69■□□□□ 0.74
SH2D4AQ9H788 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 RNU1-129P-201ENST00000384064 167 ntBASIC19.69■□□□□ 0.74
SH2D4AQ9H788 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 PMS2P4-201ENST00000412466 1052 ntBASIC19.69■□□□□ 0.74
SH2D4AQ9H788 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 U1.21-201ENST00000580816 167 ntBASIC19.69■□□□□ 0.74
SH2D4AQ9H788 AL031055.1-201ENST00000606362 631 ntBASIC19.69■□□□□ 0.74
SH2D4AQ9H788 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SH2D4AQ9H788 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SH2D4AQ9H788 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.68■□□□□ 0.74
SH2D4AQ9H788 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH2D4AQ9H788 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
SH2D4AQ9H788 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH2D4AQ9H788 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SH2D4AQ9H788 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms