Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIPK3Q9H422 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIPK3Q9H422 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
HIPK3Q9H422 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.43■□□□□ 0.54
HIPK3Q9H422 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.43■□□□□ 0.54
HIPK3Q9H422 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HIPK3Q9H422 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.42■□□□□ 0.54
HIPK3Q9H422 AP3S2-216ENST00000617003 1561 ntBASIC18.42■□□□□ 0.54
HIPK3Q9H422 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HIPK3Q9H422 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIPK3Q9H422 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
HIPK3Q9H422 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HIPK3Q9H422 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIPK3Q9H422 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HIPK3Q9H422 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
HIPK3Q9H422 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIPK3Q9H422 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIPK3Q9H422 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIPK3Q9H422 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
HIPK3Q9H422 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HIPK3Q9H422 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.42■□□□□ 0.54
HIPK3Q9H422 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
HIPK3Q9H422 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.42■□□□□ 0.54
HIPK3Q9H422 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.42■□□□□ 0.54
HIPK3Q9H422 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.42■□□□□ 0.54
HIPK3Q9H422 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.42■□□□□ 0.54
HIPK3Q9H422 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.42■□□□□ 0.54
HIPK3Q9H422 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIPK3Q9H422 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC18.42■□□□□ 0.54
HIPK3Q9H422 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HIPK3Q9H422 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HIPK3Q9H422 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HIPK3Q9H422 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
HIPK3Q9H422 HCG11-201ENST00000411553 5696 ntBASIC18.42■□□□□ 0.54
HIPK3Q9H422 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK3Q9H422 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK3Q9H422 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK3Q9H422 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK3Q9H422 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK3Q9H422 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK3Q9H422 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK3Q9H422 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK3Q9H422 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK3Q9H422 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 ATP5G2P4-201ENST00000442175 420 ntBASIC18.41■□□□□ 0.54
HIPK3Q9H422 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 HLA-V-204ENST00000476601 1289 ntBASIC18.41■□□□□ 0.54
HIPK3Q9H422 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK3Q9H422 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK3Q9H422 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK3Q9H422 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK3Q9H422 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK3Q9H422 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HIPK3Q9H422 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
HIPK3Q9H422 AC131009.4-201ENST00000624048 1740 ntBASIC18.4■□□□□ 0.54
HIPK3Q9H422 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK3Q9H422 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.4■□□□□ 0.54
HIPK3Q9H422 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
HIPK3Q9H422 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK3Q9H422 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK3Q9H422 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.4■□□□□ 0.54
HIPK3Q9H422 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.4■□□□□ 0.54
HIPK3Q9H422 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.4■□□□□ 0.54
HIPK3Q9H422 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.4■□□□□ 0.54
HIPK3Q9H422 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.4■□□□□ 0.54
HIPK3Q9H422 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK3Q9H422 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
HIPK3Q9H422 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK3Q9H422 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.4■□□□□ 0.54
HIPK3Q9H422 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.4■□□□□ 0.54
HIPK3Q9H422 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK3Q9H422 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK3Q9H422 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK3Q9H422 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK3Q9H422 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK3Q9H422 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK3Q9H422 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK3Q9H422 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.4■□□□□ 0.54
HIPK3Q9H422 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
HIPK3Q9H422 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK3Q9H422 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK3Q9H422 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HIPK3Q9H422 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HIPK3Q9H422 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms