Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 AC092053.1-201ENST00000605787 1936 ntBASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 AL365203.3-201ENST00000609742 2057 ntBASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 STK40-201ENST00000359297 4837 ntTSL 2 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LCE3DQ9BYE3 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 AC092364.2-201ENST00000596710 2692 ntBASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 AL031595.1-201ENST00000623969 4709 ntBASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LCE3DQ9BYE3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms