Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDNQ99608 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
NDNQ99608 AC005052.1-201ENST00000625181 2492 ntBASIC17.09■□□□□ 0.33
NDNQ99608 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NDNQ99608 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NDNQ99608 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDNQ99608 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NDNQ99608 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDNQ99608 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDNQ99608 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
NDNQ99608 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDNQ99608 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDNQ99608 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NDNQ99608 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
NDNQ99608 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDNQ99608 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.08■□□□□ 0.32
NDNQ99608 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDNQ99608 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.08■□□□□ 0.32
NDNQ99608 GPR89P-201ENST00000407924 1495 ntBASIC17.08■□□□□ 0.32
NDNQ99608 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDNQ99608 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
NDNQ99608 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDNQ99608 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
NDNQ99608 UPK3BP1-201ENST00000428678 509 ntBASIC17.08■□□□□ 0.32
NDNQ99608 ABCD1P5-201ENST00000445663 754 ntBASIC17.08■□□□□ 0.32
NDNQ99608 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NDNQ99608 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.08■□□□□ 0.32
NDNQ99608 FOSL1P1-201ENST00000511041 816 ntBASIC17.08■□□□□ 0.32
NDNQ99608 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDNQ99608 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.08■□□□□ 0.32
NDNQ99608 AL591684.3-201ENST00000605187 298 ntBASIC17.08■□□□□ 0.32
NDNQ99608 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.08■□□□□ 0.32
NDNQ99608 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.08■□□□□ 0.32
NDNQ99608 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDNQ99608 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDNQ99608 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.08■□□□□ 0.32
NDNQ99608 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NDNQ99608 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.08■□□□□ 0.32
NDNQ99608 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NDNQ99608 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDNQ99608 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NDNQ99608 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.08■□□□□ 0.32
NDNQ99608 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDNQ99608 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDNQ99608 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDNQ99608 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDNQ99608 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NDNQ99608 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDNQ99608 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.07■□□□□ 0.32
NDNQ99608 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDNQ99608 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.07■□□□□ 0.32
NDNQ99608 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.07■□□□□ 0.32
NDNQ99608 AP001269.4-201ENST00000609611 512 ntBASIC17.07■□□□□ 0.32
NDNQ99608 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.07■□□□□ 0.32
NDNQ99608 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.07■□□□□ 0.32
NDNQ99608 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDNQ99608 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDNQ99608 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NDNQ99608 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDNQ99608 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDNQ99608 AC097637.2-201ENST00000624096 1997 ntBASIC17.07■□□□□ 0.32
NDNQ99608 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDNQ99608 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDNQ99608 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NDNQ99608 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDNQ99608 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
NDNQ99608 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NDNQ99608 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDNQ99608 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.07■□□□□ 0.32
NDNQ99608 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.07■□□□□ 0.32
NDNQ99608 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDNQ99608 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.07■□□□□ 0.32
NDNQ99608 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
NDNQ99608 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NDNQ99608 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.07■□□□□ 0.32
NDNQ99608 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NDNQ99608 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NDNQ99608 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.06■□□□□ 0.32
NDNQ99608 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.06■□□□□ 0.32
NDNQ99608 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.06■□□□□ 0.32
NDNQ99608 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.06■□□□□ 0.32
NDNQ99608 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NDNQ99608 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NDNQ99608 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.06■□□□□ 0.32
NDNQ99608 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NDNQ99608 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.06■□□□□ 0.32
NDNQ99608 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.06■□□□□ 0.32
NDNQ99608 AL732292.2-201ENST00000609649 430 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms