Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.21■□□□□ 0.35
LRRC3BQ96PB8 RARRES2P9-201ENST00000565168 469 ntBASIC17.21■□□□□ 0.35
LRRC3BQ96PB8 AC073389.1-201ENST00000595595 795 ntBASIC17.21■□□□□ 0.35
LRRC3BQ96PB8 AC021097.1-201ENST00000607902 574 ntBASIC17.21■□□□□ 0.35
LRRC3BQ96PB8 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3BQ96PB8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3BQ96PB8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3BQ96PB8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LRRC3BQ96PB8 LINC02012-201ENST00000608206 1725 ntBASIC17.21■□□□□ 0.35
LRRC3BQ96PB8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
LRRC3BQ96PB8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.21■□□□□ 0.34
LRRC3BQ96PB8 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 FAM207CP-201ENST00000443486 507 ntBASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 AC018529.1-201ENST00000613063 361 ntBASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 PP12613-201ENST00000424958 2230 ntBASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRRC3BQ96PB8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 AL512638.1-201ENST00000457493 794 ntBASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 AC105233.2-201ENST00000523697 349 ntBASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 AF228730.5-201ENST00000530288 346 ntBASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 AL590560.3-201ENST00000623350 461 ntBASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LRRC3BQ96PB8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 AC241585.1-201ENST00000433527 519 ntBASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 SERBP1P5-201ENST00000510079 1181 ntBASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 AC027369.6-201ENST00000525520 931 ntBASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 AL035252.4-201ENST00000624174 288 ntBASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.18■□□□□ 0.34
LRRC3BQ96PB8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms