Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ALPK3Q96L96 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ALPK3Q96L96 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ALPK3Q96L96 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ALPK3Q96L96 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ALPK3Q96L96 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ALPK3Q96L96 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.19■□□□□ 0.5
ALPK3Q96L96 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ALPK3Q96L96 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18.19■□□□□ 0.5
ALPK3Q96L96 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ALPK3Q96L96 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ALPK3Q96L96 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALPK3Q96L96 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALPK3Q96L96 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ALPK3Q96L96 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALPK3Q96L96 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ALPK3Q96L96 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ALPK3Q96L96 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ALPK3Q96L96 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
ALPK3Q96L96 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALPK3Q96L96 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALPK3Q96L96 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALPK3Q96L96 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALPK3Q96L96 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 RRP7BP-205ENST00000566851 833 ntBASIC18.17■□□□□ 0.5
ALPK3Q96L96 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 AC021097.1-201ENST00000607902 574 ntBASIC18.17■□□□□ 0.5
ALPK3Q96L96 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.17■□□□□ 0.5
ALPK3Q96L96 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALPK3Q96L96 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALPK3Q96L96 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALPK3Q96L96 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALPK3Q96L96 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALPK3Q96L96 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ALPK3Q96L96 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 C2orf69P2-201ENST00000562032 1123 ntBASIC18.17■□□□□ 0.5
ALPK3Q96L96 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ALPK3Q96L96 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALPK3Q96L96 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALPK3Q96L96 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
ALPK3Q96L96 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.16■□□□□ 0.5
ALPK3Q96L96 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALPK3Q96L96 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALPK3Q96L96 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ALPK3Q96L96 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.16■□□□□ 0.5
ALPK3Q96L96 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALPK3Q96L96 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ALPK3Q96L96 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC18.16■□□□□ 0.5
ALPK3Q96L96 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.16■□□□□ 0.5
ALPK3Q96L96 RNA5SP423-201ENST00000517127 109 ntBASIC18.16■□□□□ 0.5
ALPK3Q96L96 AGER-214ENST00000538695 487 ntTSL 2 BASIC18.16■□□□□ 0.5
ALPK3Q96L96 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.16■□□□□ 0.5
ALPK3Q96L96 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms