Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 AP002490.2-201ENST00000524791 560 ntBASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CHMP6Q96FZ7 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.14■□□□□ 0.34
CHMP6Q96FZ7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 AL645728.1-201ENST00000366221 2101 ntBASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 AC009947.2-201ENST00000444014 672 ntBASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 AL512604.3-201ENST00000569583 964 ntBASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP6Q96FZ7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 AC024243.1-201ENST00000609234 778 ntBASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP6Q96FZ7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.12■□□□□ 0.33
CHMP6Q96FZ7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms