Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 LINC02199-201ENST00000506655 2702 ntBASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 KRT8P10-201ENST00000450021 1447 ntBASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 AL353593.2-201ENST00000602529 1483 ntBASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
FOXRED1Q96CU9 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 AC009336.1-201ENST00000608941 1553 ntBASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
FOXRED1Q96CU9 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 AC003669.1-201ENST00000334569 611 ntBASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 AL138831.2-201ENST00000606564 490 ntBASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 AC116407.4-201ENST00000623319 1061 ntBASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
FOXRED1Q96CU9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms