Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.91■□□□□ 0.46
ATP2A3Q93084 AC211476.1-201ENST00000503899 468 ntBASIC17.91■□□□□ 0.46
ATP2A3Q93084 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.91■□□□□ 0.46
ATP2A3Q93084 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.91■□□□□ 0.46
ATP2A3Q93084 AC005829.1-201ENST00000570002 483 ntBASIC17.91■□□□□ 0.46
ATP2A3Q93084 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A3Q93084 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
ATP2A3Q93084 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.91■□□□□ 0.46
ATP2A3Q93084 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
ATP2A3Q93084 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A3Q93084 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A3Q93084 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A3Q93084 AC080080.1-201ENST00000625121 2420 ntBASIC17.91■□□□□ 0.46
ATP2A3Q93084 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ATP2A3Q93084 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A3Q93084 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A3Q93084 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.91■□□□□ 0.46
ATP2A3Q93084 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.91■□□□□ 0.46
ATP2A3Q93084 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ATP2A3Q93084 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A3Q93084 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ATP2A3Q93084 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A3Q93084 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A3Q93084 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A3Q93084 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A3Q93084 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 AC099398.1-201ENST00000567919 2776 ntBASIC17.9■□□□□ 0.46
ATP2A3Q93084 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A3Q93084 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A3Q93084 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A3Q93084 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A3Q93084 PTCHD3P3-201ENST00000403073 906 ntBASIC17.9■□□□□ 0.46
ATP2A3Q93084 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A3Q93084 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A3Q93084 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A3Q93084 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A3Q93084 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A3Q93084 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A3Q93084 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A3Q93084 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.9■□□□□ 0.46
ATP2A3Q93084 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
ATP2A3Q93084 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ATP2A3Q93084 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
ATP2A3Q93084 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
ATP2A3Q93084 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.89■□□□□ 0.46
ATP2A3Q93084 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
ATP2A3Q93084 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.89■□□□□ 0.45
ATP2A3Q93084 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.89■□□□□ 0.45
ATP2A3Q93084 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.89■□□□□ 0.45
ATP2A3Q93084 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ATP2A3Q93084 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
ATP2A3Q93084 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ATP2A3Q93084 AP006288.1-201ENST00000446065 395 ntBASIC17.89■□□□□ 0.45
ATP2A3Q93084 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 AC018845.2-201ENST00000568326 409 ntBASIC17.89■□□□□ 0.45
ATP2A3Q93084 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ATP2A3Q93084 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
ATP2A3Q93084 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.89■□□□□ 0.45
ATP2A3Q93084 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ATP2A3Q93084 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
ATP2A3Q93084 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ATP2A3Q93084 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.89■□□□□ 0.45
ATP2A3Q93084 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
ATP2A3Q93084 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
ATP2A3Q93084 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
ATP2A3Q93084 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.89■□□□□ 0.45
ATP2A3Q93084 AP001094.4-201ENST00000579008 2176 ntBASIC17.89■□□□□ 0.45
ATP2A3Q93084 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms