Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.01□□□□□ -0.01
AP3S1Q92572 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
AP3S1Q92572 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.01□□□□□ -0.01
AP3S1Q92572 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
AP3S1Q92572 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S1Q92572 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.01□□□□□ -0.01
AP3S1Q92572 AL161772.1-201ENST00000610494 4412 ntBASIC15.01□□□□□ -0.01
AP3S1Q92572 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.01□□□□□ -0.01
AP3S1Q92572 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
AP3S1Q92572 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15□□□□□ -0.01
AP3S1Q92572 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15□□□□□ -0.01
AP3S1Q92572 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15□□□□□ -0.01
AP3S1Q92572 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15□□□□□ -0.01
AP3S1Q92572 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15□□□□□ -0.01
AP3S1Q92572 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
AP3S1Q92572 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15□□□□□ -0.01
AP3S1Q92572 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
AP3S1Q92572 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 OR2I1P-209ENST00000641730 5365 ntBASIC15□□□□□ -0.01
AP3S1Q92572 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15□□□□□ -0.01
AP3S1Q92572 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC15□□□□□ -0.01
AP3S1Q92572 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
AP3S1Q92572 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15□□□□□ -0.01
AP3S1Q92572 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15□□□□□ -0.01
AP3S1Q92572 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15□□□□□ -0.01
AP3S1Q92572 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15□□□□□ -0.01
AP3S1Q92572 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15□□□□□ -0.01
AP3S1Q92572 HLA-J-202ENST00000469281 1241 ntBASIC15□□□□□ -0.01
AP3S1Q92572 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
AP3S1Q92572 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15□□□□□ -0.01
AP3S1Q92572 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 HLA-DQB2-231ENST00000435145 2026 ntBASIC15□□□□□ -0.01
AP3S1Q92572 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
AP3S1Q92572 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15□□□□□ -0.01
AP3S1Q92572 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
AP3S1Q92572 AC006058.4-201ENST00000624016 1670 ntBASIC15□□□□□ -0.01
AP3S1Q92572 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP3S1Q92572 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.99□□□□□ -0.01
AP3S1Q92572 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.99□□□□□ -0.01
AP3S1Q92572 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 AL645728.1-201ENST00000366221 2101 ntBASIC14.99□□□□□ -0.01
AP3S1Q92572 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.99□□□□□ -0.01
AP3S1Q92572 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
AP3S1Q92572 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
AP3S1Q92572 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.99□□□□□ -0.01
AP3S1Q92572 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
AP3S1Q92572 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.99□□□□□ -0.01
AP3S1Q92572 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
AP3S1Q92572 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.99□□□□□ -0.01
AP3S1Q92572 FRMD8P1-201ENST00000440433 1524 ntBASIC14.99□□□□□ -0.01
AP3S1Q92572 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.99□□□□□ -0.01
AP3S1Q92572 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
AP3S1Q92572 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
AP3S1Q92572 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms