Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.98□□□□□ -0.01
RAB40AQ8WXH6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40AQ8WXH6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40AQ8WXH6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
RAB40AQ8WXH6 AL596257.1-201ENST00000641463 2694 ntBASIC14.98□□□□□ -0.01
RAB40AQ8WXH6 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40AQ8WXH6 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RAB40AQ8WXH6 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 TSPY12P-201ENST00000421279 868 ntBASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 AC011840.4-201ENST00000578471 627 ntBASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 AC009154.2-201ENST00000621177 724 ntBASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 AL691432.3-201ENST00000621860 400 ntBASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 AC012313.10-201ENST00000623509 926 ntBASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 AC233702.3-201ENST00000578656 1387 ntBASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RAB40AQ8WXH6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 AC112698.1-201ENST00000510299 916 ntBASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
RAB40AQ8WXH6 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
RAB40AQ8WXH6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
RAB40AQ8WXH6 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 MYCLP1-201ENST00000372451 1075 ntBASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.95□□□□□ -0.02
RAB40AQ8WXH6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms