Protein–RNA interactions for Protein: Q8WUX9

CHMP7, Charged multivesicular body protein 7, humanhuman

Predicted RBP Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7Q8WUX9 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 KRT8P49-201ENST00000604166 1432 ntBASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 USP32P1-208ENST00000506594 1164 ntBASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 TUBB1P2-201ENST00000422712 1306 ntBASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 TUBB1P1-201ENST00000503144 1300 ntBASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC27.11■■□□□ 1.93
CHMP7Q8WUX9 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 KRT43P-201ENST00000434019 910 ntBASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 AL355994.2-201ENST00000447882 704 ntBASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC27.1■■□□□ 1.93
CHMP7Q8WUX9 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 USP49-202ENST00000373010 2446 ntTSL 5 BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 MIR8072-201ENST00000614241 80 ntBASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC27.09■■□□□ 1.93
CHMP7Q8WUX9 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 AC010319.3-201ENST00000597028 470 ntBASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 RPSAP52-203ENST00000622976 1023 ntBASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 KRT8P12-202ENST00000472924 1397 ntBASIC27.08■■□□□ 1.93
CHMP7Q8WUX9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.92
CHMP7Q8WUX9 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC27.08■■□□□ 1.92
CHMP7Q8WUX9 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC27.07■■□□□ 1.92
CHMP7Q8WUX9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC27.07■■□□□ 1.92
CHMP7Q8WUX9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC27.07■■□□□ 1.92
CHMP7Q8WUX9 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
CHMP7Q8WUX9 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CHMP7Q8WUX9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CHMP7Q8WUX9 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CHMP7Q8WUX9 AC092506.1-202ENST00000401022 528 ntBASIC27.07■■□□□ 1.92
CHMP7Q8WUX9 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC27.07■■□□□ 1.92
CHMP7Q8WUX9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC27.07■■□□□ 1.92
CHMP7Q8WUX9 CTBP2P5-201ENST00000454986 1264 ntBASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms