Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 AC011676.5-201ENST00000624864 2660 ntBASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 AC140658.5-201ENST00000438532 169 ntBASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 AC004449.1-201ENST00000564240 433 ntBASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 AL645728.2-201ENST00000641974 660 ntBASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SHKBP1Q8TBC3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 AL139384.1-201ENST00000612143 3047 ntBASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 NKILA-202ENST00000614771 2598 ntBASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 AL355306.1-201ENST00000415580 579 ntBASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 SLC25A6P5-201ENST00000435663 894 ntBASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 TIMM8BP1-201ENST00000452384 211 ntBASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 AC018695.7-201ENST00000624587 2492 ntBASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SHKBP1Q8TBC3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 AC133963.1-201ENST00000504166 1679 ntBASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 AC023141.5-201ENST00000458585 616 ntBASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 HLA-J-203ENST00000494367 1087 ntBASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 AC109322.1-201ENST00000524499 1264 ntBASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 AC093520.2-201ENST00000561830 333 ntBASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SHKBP1Q8TBC3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SHKBP1Q8TBC3 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SHKBP1Q8TBC3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHKBP1Q8TBC3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHKBP1Q8TBC3 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHKBP1Q8TBC3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
SHKBP1Q8TBC3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHKBP1Q8TBC3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHKBP1Q8TBC3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SHKBP1Q8TBC3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
SHKBP1Q8TBC3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 AL671277.1-201ENST00000429656 993 ntBASIC17.76■□□□□ 0.43
SHKBP1Q8TBC3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms