Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 CROCCP1-201ENST00000426910 5675 ntBASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 AC100757.3-201ENST00000622361 1406 ntBASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 AC046185.3-201ENST00000623228 1824 ntBASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 IGHV3-71-201ENST00000523324 359 ntBASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 AC008267.7-201ENST00000624570 1194 ntBASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.97■□□□□ 0.15
SNIP1Q8TAD8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 AC022144.1-201ENST00000602255 1580 ntBASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 WASH6P-202ENST00000359512 1437 ntBASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 TSSK5P-201ENST00000423978 907 ntBASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 SPTLC1P1-201ENST00000447199 261 ntBASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 AP000842.3-202ENST00000569238 1080 ntBASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 AL590560.3-201ENST00000623350 461 ntBASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
SNIP1Q8TAD8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
SNIP1Q8TAD8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
SNIP1Q8TAD8 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SNIP1Q8TAD8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
SNIP1Q8TAD8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
SNIP1Q8TAD8 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC15.96■□□□□ 0.14
SNIP1Q8TAD8 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.95■□□□□ 0.14
SNIP1Q8TAD8 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms