Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 AC005052.1-201ENST00000625181 2492 ntBASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.31■□□□□ 0.04
BBS1Q8NFJ9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 AC009533.2-201ENST00000543664 586 ntBASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 AC011467.2-201ENST00000598425 242 ntBASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.3■□□□□ 0.04
BBS1Q8NFJ9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 TUBB8P12-201ENST00000308911 1335 ntBASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 TUBB7P-202ENST00000428444 1305 ntBASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 TUBB8P7-204ENST00000567960 1332 ntBASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
BBS1Q8NFJ9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms