Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN22Q8N7P3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.51■□□□□ 0.07
CLDN22Q8N7P3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN22Q8N7P3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLDN22Q8N7P3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
CLDN22Q8N7P3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN22Q8N7P3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN22Q8N7P3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN22Q8N7P3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN22Q8N7P3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN22Q8N7P3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN22Q8N7P3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CLDN22Q8N7P3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CLDN22Q8N7P3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 AC092171.3-201ENST00000610122 2651 ntBASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 KRT17P6-201ENST00000453795 1220 ntBASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 AC092119.3-201ENST00000612618 583 ntBASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 AC073592.5-201ENST00000624854 528 ntBASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
CLDN22Q8N7P3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 ARMC10P1-201ENST00000313754 855 ntBASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 IGHV3-47-201ENST00000425060 335 ntBASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 ACTG1P4-201ENST00000425123 1122 ntBASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 AP000867.3-201ENST00000524675 377 ntBASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 AC074051.2-201ENST00000565115 352 ntBASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 Z69720.1-201ENST00000601483 472 ntBASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 AC010331.1-201ENST00000611423 582 ntBASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 NPAP1P7-201ENST00000613027 823 ntBASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLDN22Q8N7P3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN22Q8N7P3 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN22Q8N7P3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.48■□□□□ 0.07
CLDN22Q8N7P3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN22Q8N7P3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN22Q8N7P3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLDN22Q8N7P3 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms