Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 AC098831.1-202ENST00000438821 336 ntBASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 PCDHB17P-201ENST00000539533 2393 ntBASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 AC002310.6-201ENST00000624451 1377 ntBASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATPAF2Q8N5M1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
ATPAF2Q8N5M1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ATPAF2Q8N5M1 AC009053.2-201ENST00000563701 2365 ntBASIC17.39■□□□□ 0.38
ATPAF2Q8N5M1 KRT8P49-201ENST00000604166 1432 ntBASIC17.39■□□□□ 0.38
ATPAF2Q8N5M1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 AP002490.2-201ENST00000524791 560 ntBASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 AC116407.3-201ENST00000623905 1129 ntBASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 HLA-A-201ENST00000376802 1334 ntBASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.39■□□□□ 0.37
ATPAF2Q8N5M1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 AC108073.2-201ENST00000464002 357 ntBASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ATPAF2Q8N5M1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ATPAF2Q8N5M1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms