Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 TSPY16P-201ENST00000449843 468 ntBASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.37□□□□□ -0.11
RAI1Q7Z5J4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 ALG1L8P-201ENST00000533887 760 ntBASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 KRT8P23-201ENST00000560090 1207 ntBASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RAI1Q7Z5J4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 AC131009.4-201ENST00000624048 1740 ntBASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 SPCS2P4-201ENST00000436160 681 ntBASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 AC092474.2-201ENST00000424288 719 ntBASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.35□□□□□ -0.11
RAI1Q7Z5J4 CRB3P1-201ENST00000449338 276 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms