Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCDC62Q6P9F0 AL138688.1-201ENST00000624851 1594 ntBASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 HCG4-201ENST00000418983 998 ntBASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 AC005237.2-201ENST00000434368 219 ntBASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 SPCS2P4-201ENST00000436160 681 ntBASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 AC091167.2-201ENST00000579581 588 ntBASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.02■□□□□ 0.64
CCDC62Q6P9F0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC62Q6P9F0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC62Q6P9F0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CCDC62Q6P9F0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC62Q6P9F0 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCDC62Q6P9F0 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 GPS2P2-201ENST00000430745 888 ntBASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 AC134043.2-201ENST00000624206 2238 ntBASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCDC62Q6P9F0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC62Q6P9F0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC62Q6P9F0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19■□□□□ 0.63
CCDC62Q6P9F0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC62Q6P9F0 NOC2LP2-201ENST00000407594 1944 ntBASIC19■□□□□ 0.63
CCDC62Q6P9F0 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC62Q6P9F0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC62Q6P9F0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19■□□□□ 0.63
CCDC62Q6P9F0 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC62Q6P9F0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC19■□□□□ 0.63
CCDC62Q6P9F0 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC62Q6P9F0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19■□□□□ 0.63
CCDC62Q6P9F0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC62Q6P9F0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC62Q6P9F0 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19■□□□□ 0.63
CCDC62Q6P9F0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC62Q6P9F0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC62Q6P9F0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC62Q6P9F0 AL512356.2-201ENST00000546955 174 ntBASIC19■□□□□ 0.63
CCDC62Q6P9F0 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19■□□□□ 0.63
CCDC62Q6P9F0 SPCS2P1-201ENST00000561636 679 ntBASIC19■□□□□ 0.63
CCDC62Q6P9F0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC62Q6P9F0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCDC62Q6P9F0 AC084121.4-201ENST00000641598 221 ntBASIC19■□□□□ 0.63
CCDC62Q6P9F0 AF228730.8-201ENST00000642140 221 ntBASIC19■□□□□ 0.63
CCDC62Q6P9F0 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC62Q6P9F0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC19■□□□□ 0.63
CCDC62Q6P9F0 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC62Q6P9F0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19■□□□□ 0.63
CCDC62Q6P9F0 FRMD8P1-201ENST00000440433 1524 ntBASIC19■□□□□ 0.63
CCDC62Q6P9F0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCDC62Q6P9F0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCDC62Q6P9F0 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms